Detail information of GWHGAAEX017548/evm.TU.scaffold_82.60


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG29532.00E-07mRNA-binding protein Encore
nrgi|672194023|ref|XP_008776184.1|4.02E-84PREDICTED: uncharacterized protein LOC103696367 [Phoenix dactylifera]
trEMBLtr|M0TYA0|M0TYA0_MUSAM5.00E-83Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P07410_001}
TAIRHS76618742.00E-07Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007828862902929942-
Transcript Sequence

Network for GWHGAAEX017548

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01424.21R3H25843.50E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms36.760
SRR2545915Juvenile tuber35.190
SRP108465SRR5643513five period of Gastrodia elata22.040
SRR5643514five period of Gastrodia elata18.890
SRR5643515five period of Gastrodia elata26.090
SRR5643524five period of Gastrodia elata20.340
SRR5643525five period of Gastrodia elata15.910
SRR5643528five period of Gastrodia elata21.690
SRR5643658five period of Gastrodia elata19.190
SRR5643659five period of Gastrodia elata21.580
SRR5643660five period of Gastrodia elata20.070
SRR5643661five period of Gastrodia elata20.580
SRR5643662five period of Gastrodia elata23.590
SRR5643663five period of Gastrodia elata19.000
SRR5643664five period of Gastrodia elata20.560
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.750
SRR6049655Rhizomagastrodiae_C368-T10_good_120.600
SRR6049656Rhizomagastrodiae_C368-T07_good_125.080
SRR6049657Rhizomagastrodiae_C368-T07_good_119.820
SRR6049658Rhizomagastrodiae_C368-T04_good_122.210
SRR6049659Rhizomagastrodiae_C368-T04_good_124.510
SRR6049660Rhizomagastrodiae_C368-T01_good_124.760
SRR6049661Rhizomagastrodiae_C368-T04_good_121.670
SRR6049662Rhizomagastrodiae_C368-T01_good_118.100
SRR6049663Rhizomagastrodiae_C368-T01_good_122.980
SRR6049664Rhizomagastrodiae_C368-T10_good_122.630
SRR6049665Rhizomagastrodiae_C368-T10_good_122.630
SRP279888GastroGastrodia elata tuber 27.06
JuvenJuvenile tuber23.72
Mother_GastroMother tuber of Gastrodia elata 29.29
Mother_JuvenMother tuber of Juvenile 25.53