Gene detail

Detail information of GWHGAAEX017550/evm.TU.scaffold_82.62

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672134536\|ref\|XP_008790919.1\|	2.46E-108	PREDICTED: spindle pole body component 110-like [Phoenix dactylifera]
trEMBL	tr\|M0TRG5\|M0TRG5_MUSAM	2.00E-86	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P18120_001}
TAIR	AT4G40020	8.00E-34	Myosin heavy chain-related protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000078	3038384	3040861	+

Transcript Sequence
>GWHTAAEX017550 GGACTGCCGTTCGGCATGAAAAATCAGAACCCGTCCCCCGTCAACTCTTTCGCTGGATCCTTCTCTCTTTTCGTAGAGAAACCTTGTGAATTCAGAAGAATCCAACCCTCAGTGTGGATAACAAGAGCAATCGAAGCCTCGAATCTCCTCAAATCTTGATTTTGAGTCCTGAAGTTTCTCCAATATGCAAGGATTCAGGCCTAGAACTGTGCCTTCTGACCCTCAAACAAAGAGCTTCAATCATTCCAGTCCTAATCCGAAGAGAAGCCCTTCGCCTAAAATAGCCAGACGATCTTCTTCTCCATCAAATTCCGGTGATTCTAGGGTTTCTAAGGTTTCCGAGCAGAAGTTCTCTCCCGTGTCTCATTCTTTCCAAGAGAAACAAAAAACAATGCGAGTTTCTGAGATGCAGCAACAACTGGAGAAGGTTATGGAGGATATGAAGAGGGCAAAGGCGGACAGATCCCAAGCACTTGAAGAACTTGAGGAACTGAAGAAGAGGAATACGAGCTCCGCTCATAGCAATGATAGGATTCTGATGCTTGAGTTAGAAGTTGAAAAGGCCAAGGAATCTGAAATGAAATTGCTGGAGTCTTTGATTTCTCAGACCAAGCAACTCGAAGAAACAAAGATTTTGCTTGAGGAGGCCAAACTAGATATCAGGAATATAAGGGATGCCCCAGGGGCAGGATTATTAGCATCTGTTCAGACTATTCAGGCTCAAGAGGAGATCAGAATGCTCAGAAATGAGCTTCGTTTAGCACTGCAGGCAGAGGAGAAGAGCAAGAAGGCAATGGATGATTTTGTAATTGCACTTAAAGAAGTAACCACTGAAGTTACTCAGACAAAGGAGGATCTTTATGCGAGAAACTCTGAGCTGGAGAAAGTGAAAGCAGATGCTGAACATTCTGAATACATGCTGCGAAGCACAGAGCAGAGACTAAAGGAATCTGTGAAGGGATATGATAAGCTGAAGTTGGAATTCGAGGAATCTGCTGCTGCTTGGAAAACCAGAGAGGATAGCTTCTTAAACTGCATCAAATTTTCTGAAGAAGATATGGAAAAGAAGGATGAAGAAAACAGGAAGCTGGATGATGCCAATAAGGCGGCAAAGGAAGAGAATTATAGGTTGCGAGATATCATCAAACAAGCAGTGAACGAAGCCACTGTGGCTAAGGATTCTCTGGCAATTGCACGGAATGAAAATTATGAGCTCAAGGAACTACTCTTTGAGAAAGAGGGTGCCTTGGAGAGAATCACACAGGACTTAGAAAGTCTTAAAGCCAGTGAAACTGTTGTCCTTGACCATAAGGAGGGGACTAAGAGCCAAGTTTCCTCGTCTTTAATTGCAGATTCAATGTTGACATCAAATTTTTCAGAAGTTGAACCATTTGAACATTTAAAAGTAGGGAGTGATGAGAAGAAGATCTATAGAACTCTAAATAAATTCTCATCCGATCGATGGGATAACCCTCGGATCCAAAATGGTACCAGGCGATCAGTCGGAGAGGCAGATATGTTACACAGCTTTGCATTAGATAAAAAAGGGGTGTTTGGAAACCAAGACACGGGATTAAACTCTGATGCTTTTGACCATTTAGAGGGAGTATTTTTTAACAACCCGGAGAATGATAAGCAGAAGAAAAAGAAGACAGTTTTTGGAAGATTTGGGGACGCATTGAGGAGGAGGAGCTTTCGCAAAACGTAATTTATGATAACAGGTAAGTAAAAACCTGGATGTTATTGATATTTTTCTTTATACAGAAGCCCTTTTTTGTATTCCTGCTTTTCAAAGAGATATAGCTTGTAGTTTAGGTTAATCCATCAGCACTATGATTATAAACAAGATGAACTCTTGCTAGAGTCATCTTTAATTGGCTGGATGACCATGTTTCAAAGAATGTCTATATAAATTTCTGCCCATATTTCAACGATTTGAATTTAATTATACATGTATGTGCAAAAATTATTTGTTAGCTTTAGTTTTGTATTAAGGGGCAGTTTTGTGTACCGCATAATGAAGATGCTAGTAATATCAAGATGTCCATTAAATAAGCATTATTGTCTGTTTGGTTCAATGCTATTGTATTCAAGGTATTAAGGTATAATACTTTTTGGGCGTGAGCTCTTCATTGCTCCCCAACTTATGTGAGGCTTGCAAATTTTGTTAATGAAAGACAATGGGGATTTGGAGATGC

Network for GWHGAAEX017550

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	88.600
SRP064423	SRR2545915	Juvenile tuber	77.570
SRP108465	SRR5643513	five period of Gastrodia elata	46.500
	SRR5643514	five period of Gastrodia elata	46.050
	SRR5643515	five period of Gastrodia elata	46.570
	SRR5643524	five period of Gastrodia elata	52.040
	SRR5643525	five period of Gastrodia elata	60.750
	SRR5643528	five period of Gastrodia elata	54.140
	SRR5643658	five period of Gastrodia elata	60.520
	SRR5643659	five period of Gastrodia elata	50.140
	SRR5643660	five period of Gastrodia elata	56.020
	SRR5643661	five period of Gastrodia elata	46.550
	SRR5643662	five period of Gastrodia elata	56.480
	SRR5643663	five period of Gastrodia elata	62.350
	SRR5643664	five period of Gastrodia elata	68.150
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	47.310
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	59.380
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	49.560
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	44.900
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	51.750
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	56.680
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	47.100
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	44.620
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	41.850
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	48.680
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	53.840
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	53.840
SRP279888	Gastro	Gastrodia elata tuber	71.76
	Juven	Juvenile tuber	57.10
	Mother_Gastro	Mother tuber of Gastrodia elata	71.46
	Mother_Juven	Mother tuber of Juvenile	69.17