Detail information of GWHGAAEX017555/evm.TU.scaffold_82.76


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|720054195|ref|XP_010272971.1|2.28E-83PREDICTED: transcription factor bHLH96-like [Nelumbo nucifera]
Swissprottr|Q9C7T4|BH096_ARATH7.00E-67Transcription factor bHLH96
trEMBLtr|J3LKT3|J3LKT3_ORYBR1.00E-77Uncharacterized protein {ECO:0000313|EnsemblPlants:OB03G16590.1}
TAIRAT1G722102.00E-66basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007837876323789075+
Transcript Sequence

Network for GWHGAAEX017555

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.25HLH1151661.00E-10
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.210
SRR2545915Juvenile tuber0.400
SRP108465SRR5643513five period of Gastrodia elata7.970
SRR5643514five period of Gastrodia elata36.920
SRR5643515five period of Gastrodia elata2.640
SRR5643524five period of Gastrodia elata10.290
SRR5643525five period of Gastrodia elata0.150
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.180
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.050
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.760
SRR6049655Rhizomagastrodiae_C368-T10_good_128.210
SRR6049656Rhizomagastrodiae_C368-T07_good_124.440
SRR6049657Rhizomagastrodiae_C368-T07_good_13.960
SRR6049658Rhizomagastrodiae_C368-T04_good_14.630
SRR6049659Rhizomagastrodiae_C368-T04_good_12.470
SRR6049660Rhizomagastrodiae_C368-T01_good_114.820
SRR6049661Rhizomagastrodiae_C368-T04_good_14.830
SRR6049662Rhizomagastrodiae_C368-T01_good_136.710
SRR6049663Rhizomagastrodiae_C368-T01_good_133.260
SRR6049664Rhizomagastrodiae_C368-T10_good_151.890
SRR6049665Rhizomagastrodiae_C368-T10_good_151.890
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber0.04
Mother_GastroMother tuber of Gastrodia elata 0.00
Mother_JuvenMother tuber of Juvenile 0.00