Detail information of GWHGAAEX017563/evm.TU.scaffold_83.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG37564.00E-124Pinin (desmosome-associated protein)
nrgi|672164414|ref|XP_008802082.1|5.46E-176PREDICTED: pinin-like [Phoenix dactylifera]
trEMBLtr|A0A0A0L734|A0A0A0L734_CUCSA7.00E-142Uncharacterized protein {ECO:0000313|EMBL:KGN57548.1}
TAIRAT1G152004.00E-124protein-protein interaction regulator family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000079131015147085+
Transcript Sequence

Network for GWHGAAEX017563

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04696.12Pinin_SDK_memA1682961.20E-29
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13114PNN RNA transport map03013
mRNA surveillance pathwaymap03015

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms103.750
SRR2545915Juvenile tuber92.330
SRP108465SRR5643513five period of Gastrodia elata79.520
SRR5643514five period of Gastrodia elata73.090
SRR5643515five period of Gastrodia elata75.480
SRR5643524five period of Gastrodia elata66.640
SRR5643525five period of Gastrodia elata92.420
SRR5643528five period of Gastrodia elata71.420
SRR5643658five period of Gastrodia elata86.980
SRR5643659five period of Gastrodia elata99.710
SRR5643660five period of Gastrodia elata104.520
SRR5643661five period of Gastrodia elata96.090
SRR5643662five period of Gastrodia elata87.650
SRR5643663five period of Gastrodia elata93.170
SRR5643664five period of Gastrodia elata97.440
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1100.330
SRR6049655Rhizomagastrodiae_C368-T10_good_177.630
SRR6049656Rhizomagastrodiae_C368-T07_good_189.690
SRR6049657Rhizomagastrodiae_C368-T07_good_1104.590
SRR6049658Rhizomagastrodiae_C368-T04_good_1112.780
SRR6049659Rhizomagastrodiae_C368-T04_good_1116.900
SRR6049660Rhizomagastrodiae_C368-T01_good_1107.150
SRR6049661Rhizomagastrodiae_C368-T04_good_191.680
SRR6049662Rhizomagastrodiae_C368-T01_good_174.480
SRR6049663Rhizomagastrodiae_C368-T01_good_187.130
SRR6049664Rhizomagastrodiae_C368-T10_good_165.570
SRR6049665Rhizomagastrodiae_C368-T10_good_165.570
SRP279888GastroGastrodia elata tuber 101.73
JuvenJuvenile tuber119.37
Mother_GastroMother tuber of Gastrodia elata 110.27
Mother_JuvenMother tuber of Juvenile 117.82