Detail information of GWHGAAEX017565/evm.TU.scaffold_83.6


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|720039729|ref|XP_010268396.1|3.12E-20PREDICTED: tetraspanin-8-like [Nelumbo nucifera]
Swissprottr|Q8S8Q6|TET8_ARATH5.00E-17Tetraspanin-8
trEMBLtr|W1PHQ2|W1PHQ2_AMBTC2.00E-20Uncharacterized protein {ECO:0000313|EMBL:ERN07151.1}
TAIRAT2G238102.00E-16tetraspanin8

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000079492751518710-
Transcript Sequence

Network for GWHGAAEX017565

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata3.060
SRR5643514five period of Gastrodia elata5.040
SRR5643515five period of Gastrodia elata3.690
SRR5643524five period of Gastrodia elata2.940
SRR5643525five period of Gastrodia elata11.150
SRR5643528five period of Gastrodia elata8.610
SRR5643658five period of Gastrodia elata11.470
SRR5643659five period of Gastrodia elata7.000
SRR5643660five period of Gastrodia elata3.850
SRR5643661five period of Gastrodia elata5.680
SRR5643662five period of Gastrodia elata6.170
SRR5643663five period of Gastrodia elata6.250
SRR5643664five period of Gastrodia elata2.830
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.860
SRR6049655Rhizomagastrodiae_C368-T10_good_14.830
SRR6049656Rhizomagastrodiae_C368-T07_good_13.230
SRR6049657Rhizomagastrodiae_C368-T07_good_11.590
SRR6049658Rhizomagastrodiae_C368-T04_good_10.660
SRR6049659Rhizomagastrodiae_C368-T04_good_10.780
SRR6049660Rhizomagastrodiae_C368-T01_good_11.750
SRR6049661Rhizomagastrodiae_C368-T04_good_10.540
SRR6049662Rhizomagastrodiae_C368-T01_good_11.350
SRR6049663Rhizomagastrodiae_C368-T01_good_10.660
SRR6049664Rhizomagastrodiae_C368-T10_good_12.830
SRR6049665Rhizomagastrodiae_C368-T10_good_12.830
SRP279888GastroGastrodia elata tuber 6.45
JuvenJuvenile tuber4.70
Mother_GastroMother tuber of Gastrodia elata 6.96
Mother_JuvenMother tuber of Juvenile 5.58