Detail information of GWHGAAEX017576/evm.TU.scaffold_83.32


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|262198500|ref|YP_003269709.1|3.00E-44cation transport protein ChaC [Haliangium ochraceum DSM 14365]
KOGKOG31823.00E-79Predicted cation transporter
nrgi|743860790|ref|XP_010943105.1|4.69E-96PREDICTED: cation transport regulator-like protein 2 isoform X1 [Elaeis guineensis]
trEMBLtr|A0A059C027|A0A059C027_EUCGR2.00E-95Uncharacterized protein {ECO:0000313|EMBL:KCW71270.1}
TAIRAT1G447903.00E-79ChaC-like family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007922069902224139+
Transcript Sequence

Network for GWHGAAEX017576

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04752.11ChaC31801.30E-49
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K22596GGCT Metabolic pathways map01100
Glutathione metabolismmap00480

Gene Ontology

GO term OntologyName
GO:0006751Biological Processglutathione catabolic process
GO:0003839Molecular Functiongamma-glutamylcyclotransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms113.510
SRR2545915Juvenile tuber155.290
SRP108465SRR5643513five period of Gastrodia elata100.750
SRR5643514five period of Gastrodia elata138.000
SRR5643515five period of Gastrodia elata111.110
SRR5643524five period of Gastrodia elata129.660
SRR5643525five period of Gastrodia elata256.720
SRR5643528five period of Gastrodia elata226.070
SRR5643658five period of Gastrodia elata299.430
SRR5643659five period of Gastrodia elata77.480
SRR5643660five period of Gastrodia elata82.680
SRR5643661five period of Gastrodia elata69.810
SRR5643662five period of Gastrodia elata84.010
SRR5643663five period of Gastrodia elata80.100
SRR5643664five period of Gastrodia elata84.960
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1119.140
SRR6049655Rhizomagastrodiae_C368-T10_good_166.130
SRR6049656Rhizomagastrodiae_C368-T07_good_1159.080
SRR6049657Rhizomagastrodiae_C368-T07_good_1101.940
SRR6049658Rhizomagastrodiae_C368-T04_good_1111.060
SRR6049659Rhizomagastrodiae_C368-T04_good_1136.790
SRR6049660Rhizomagastrodiae_C368-T01_good_1146.250
SRR6049661Rhizomagastrodiae_C368-T04_good_1111.550
SRR6049662Rhizomagastrodiae_C368-T01_good_1119.870
SRR6049663Rhizomagastrodiae_C368-T01_good_1158.700
SRR6049664Rhizomagastrodiae_C368-T10_good_1144.330
SRR6049665Rhizomagastrodiae_C368-T10_good_1144.330
SRP279888GastroGastrodia elata tuber 221.12
JuvenJuvenile tuber122.34
Mother_GastroMother tuber of Gastrodia elata 173.89
Mother_JuvenMother tuber of Juvenile 118.49