Detail information of GWHGAAEX017577/evm.TU.scaffold_83.33


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16591.00E-39Class 2 transcription repressor NC2, alpha subunit (DRAP1)
nrgi|672118075|ref|XP_008782237.1|4.29E-87PREDICTED: dr1-associated corepressor homolog isoform X1 [Phoenix dactylifera]
Swissprottr|Q9ZVL3|NFYC3_ARATH7.00E-11Nuclear transcription factor Y subunit C-3
trEMBLtr|M0RG63|M0RG63_MUSAM1.00E-78Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P07370_001}
TAIRAT3G124801.00E-39nuclear factor Y, subunit C11

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007922244262254130-
Transcript Sequence

Network for GWHGAAEX017577

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00808.22CBFD_NFYB_HMF21842.90E-19
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNF-YC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046982Molecular Functionprotein heterodimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms48.130
SRR2545915Juvenile tuber48.530
SRP108465SRR5643513five period of Gastrodia elata49.970
SRR5643514five period of Gastrodia elata55.400
SRR5643515five period of Gastrodia elata48.110
SRR5643524five period of Gastrodia elata54.550
SRR5643525five period of Gastrodia elata53.620
SRR5643528five period of Gastrodia elata49.570
SRR5643658five period of Gastrodia elata54.740
SRR5643659five period of Gastrodia elata45.240
SRR5643660five period of Gastrodia elata41.390
SRR5643661five period of Gastrodia elata48.220
SRR5643662five period of Gastrodia elata51.850
SRR5643663five period of Gastrodia elata48.390
SRR5643664five period of Gastrodia elata44.750
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_131.580
SRR6049655Rhizomagastrodiae_C368-T10_good_132.270
SRR6049656Rhizomagastrodiae_C368-T07_good_134.730
SRR6049657Rhizomagastrodiae_C368-T07_good_137.010
SRR6049658Rhizomagastrodiae_C368-T04_good_131.260
SRR6049659Rhizomagastrodiae_C368-T04_good_136.600
SRR6049660Rhizomagastrodiae_C368-T01_good_131.800
SRR6049661Rhizomagastrodiae_C368-T04_good_128.200
SRR6049662Rhizomagastrodiae_C368-T01_good_132.260
SRR6049663Rhizomagastrodiae_C368-T01_good_132.940
SRR6049664Rhizomagastrodiae_C368-T10_good_149.650
SRR6049665Rhizomagastrodiae_C368-T10_good_149.650
SRP279888GastroGastrodia elata tuber 57.36
JuvenJuvenile tuber75.74
Mother_GastroMother tuber of Gastrodia elata 43.94
Mother_JuvenMother tuber of Juvenile 50.76