Gene detail

Detail information of GWHGAAEX017583/evm.TU.scaffold_83.46

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|134098662\|ref\|YP_001104323.1\|	2.00E-31	serine/threonine protein kinase [Saccharopolyspora erythraea NRRL 2338]
KOG	KOG0198	0	MEKK and related serine/threonine protein kinases
nr	gi\|695003404\|ref\|XP_009385293.1\|	0	PREDICTED: mitogen-activated protein kinase kinase kinase NPK1-like [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q40541\|NPK1_TOBAC	0	Mitogen-activated protein kinase kinase kinase NPK1
trEMBL	tr\|M0S5C7\|M0S5C7_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr2P05360_001}
TAIR	AT1G09000	0	NPK1-related protein kinase 1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000079	3186148	3218969	-

Transcript Sequence
>GWHTAAEX017583 AAACAACATCAAATCAAGAGCTGAATCATTGTTTTATTTTTTATTTTGATCCTTTTAATAATCCATAAGTCGCTTACTGTGTCCCCTCAGAAGCAAATCCGTCATTTTTCATAAAAAAACAATCCGCCGTCCCTTCGTTTCAAACTTTCAGTTCCGCACTGAGTATTGCCACATTTAGACGGAAATCAAAGAACGTATGAAGGAAAGAAGATGCAAGATCTCTTTGGATCGGTTCGGCGCTCTTTCTCTCTCCGTTCGAATCCTGCTGGAAACAATGGCGCTGCCGCCGGCGAAGGCACGGGCGCCCGCATTGTTGAAAAAATTGGGTCATGTTTGAGAAAATCAAGGGTGGGATTTGGCCTAGGGTTAGGGTTTTCTCCAAAACTCTCTCAGGCTATGACCAAGGATGACGCCTCTCCGATCCGGTGGAGAAAGGGCGAGCTCATTGGCTGCGGCGCCTTTGGCCACGTCTACATGGGGATGAATTTAGATTCTGGGGAGTTGCTCGCTGTAAAGCAGGTTTTGATCGGAACGAACAATGCTTCGAAAGATAAAGCCCAAGCTCATGTAAGGGAACTCGAGGAAGAGGTGAAGCTTCTCAAGAACTTGTCCCATCCAAATATTGTTAGATATTTGGGAACTGTAAGGGAGGAAGAGACCCTAAATATCTTATTGGAGTTTGTACCTGGTGGTTCCATTTCATCACTGTTGGGAAAATTTGGATCCTTTCCTGAGGCTGTTATAAAAATGTACACCAAGCAGATATTGCAGGGACTGGAATATCTTCATAAGAGTGGAATTATTCATAGAGATATAAAGGGCGCAAACATTCTTGTTGATAATAAAGGATGTATTAAACTGGCAGATTTTGGAGCATCGAAACAAGTGGCCAAGCTGGCAACAATGACAGCAGCGAAGTCGATGAAAGGCACTCCATACTGGATGGCTCCAGAAGTAATCCTTCAAACAGGCCATACCTACTCTGCAGACATATGGAGTGTTGGTTGTACTGTTATTGAGATGGCTACTGGAAAACCTCCATGGAGCCAGCAATATCAAGAGGTTGCAGCTTTATTTTACATTGGGACTACAAAGTCGCATCCTCCCATTCCCGAGCATCTTTCATCAGAAGCAAAAAATTTTCTCTTAAAATGCTTACAAAAGGAACCAAACTTAAGGCCATCTGCTTCAGATTTACTTCAGCATCCTTTTGTTGCAAATGACTTTGAAGATTTAAAATCAGTTCATTGCCATTCAGCAACTGATTCTTCCAAAGGTACTGCTCCAGTTTCTAAATCTTTCATGAACGATCTAAGTTTTGGAGATGTAGAGCACAGTGGAGGCTACACTGAACGTATTTCTAGGCTTAAACCCATTTGGGGCACGAATTCCTGTGATGATATGTGCCAAATATTTGACAAGGATGATTTTCCTGGAGTTGGATCTAGTTTCAATCCCATATCAGAACCATTTGATGGATACCCATCCAAAAATGATGCAAATCTGCAAAATGTCGGAGCATATTTCAATGATTTAGGAGAATCATCAAATGGGGAGGGCAAATCTACATTCCCATGTGAGCCTACATGCGAGGATGATGATGATGAAGTCATAGAAATGAAAATCAGAGCTTTTCTAGATGAAAAGGCTCATGATCTGAAGAAGCTGCAAACTCCATTATATGAAGAGTTCTTCAATAGCTTAAGTGACATTCCCGAAGCATTTGACCGCAATGCAGGAGAAGAATATGGCCCAGGAGACACAGAACTACCTTTTATTAAGAACTCAAAGCCCTTTTCTATCAAGATTGCAAGCCCAGGAGACACAGAACTGGCTTTTATTAAGAACTCAAAGCCCTTTTCTGGCAAGATTGCAGGCGATTCATTAGCTACATGTTCAGAAAGCTCCCCTACTCGAACCCCAAGAGGATTAAATATTGGATTAGACGGAAATCCTATTCTTAGGGAAATTCCTTCAGCTCAACTCAACGAGTTGGAAGGTCTTCAGGATTCACAGCCAGAAGAGAATAGCCCAAGGCACAAAAAGTGGAAAGAAGAGCTAGACCAAGAACTGGAACGTCAAAGAGAGATTCGTCAGGCTAATGGAGTTGGGAAGTTCTCTCCATTGCATAGATGTGCCAGCCGAAGAAGACAGGATCGGATGACATTCATGTCCCCAAGGAAGTAGCCATCTGCCGACGAGCTCTTTGTAAATGGATACGATATGATCGAGATTATGCTGGCGATGTTTCAAACGAAAATAAATTTCAATTTATGTAATGTAAATTCTGACTGGGTTGCTAAAGTTATCTGATATATTCAGCTTCAAAAATTTCCTTTTTTTTTTTTCACATAGAATGAACTCTTCAGCAAAATGATATAATGCTGCGAGCAGTGAAGTGCATGTCTTGACTTCATTAGTTATTTTGCTGCAAGTTACTTGAGAGATGCTTTTTTGTCTGGTAAAAGAAACCAATCTGTGCATTTATTCTCTGAGTTCATTTTTATTTTATTTGAAGTTAATGATAAATGTATTTCCTGGCATACAATATAAGATATACTTAACTGATAATTGTGATCTGGATGCCATTATGTTATCC

Network for GWHGAAEX017583

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.24	Pkinase	74	335	1.00E-73

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	STE_STE11

KEGG pathway

KO	Enzyme	pathway	mapID
K20606	ANP1	MAPK signaling pathway - plant	map04016

Gene Ontology

GO term	Ontology	Name
GO:0006468	Biological Process	protein phosphorylation
GO:0004672	Molecular Function	protein kinase activity
GO:0005524	Molecular Function	ATP binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	18.590
SRP064423	SRR2545915	Juvenile tuber	26.160
SRP108465	SRR5643513	five period of Gastrodia elata	26.630
	SRR5643514	five period of Gastrodia elata	35.160
	SRR5643515	five period of Gastrodia elata	28.490
	SRR5643524	five period of Gastrodia elata	34.230
	SRR5643525	five period of Gastrodia elata	25.300
	SRR5643528	five period of Gastrodia elata	24.680
	SRR5643658	five period of Gastrodia elata	24.410
	SRR5643659	five period of Gastrodia elata	20.400
	SRR5643660	five period of Gastrodia elata	21.830
	SRR5643661	five period of Gastrodia elata	22.280
	SRR5643662	five period of Gastrodia elata	24.870
	SRR5643663	five period of Gastrodia elata	24.310
	SRR5643664	five period of Gastrodia elata	25.910
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	20.930
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	27.340
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	22.880
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	17.630
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	16.210
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	13.400
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	17.320
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	17.160
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	28.040
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	25.210
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	27.150
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	27.150
SRP279888	Gastro	Gastrodia elata tuber	33.14
	Juven	Juvenile tuber	23.56
	Mother_Gastro	Mother tuber of Gastrodia elata	25.41
	Mother_Juven	Mother tuber of Juvenile	21.72