Detail information of GWHGAAEX017584/evm.TU.scaffold_83.47


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|83647568|ref|YP_436003.1|4.00E-24serine/threonine protein kinase [Hahella chejuensis KCTC 2396]
KOGKOG06005.00E-152Cdc2-related protein kinase
nrgi|590708079|ref|XP_007048177.1|0Serine/threonine-protein kinase [Theobroma cacao]
Swissprottr|Q9ZVM9|Y1461_ARATH1.00E-152Probable serine/threonine-protein kinase At1g54610
trEMBLtr|A0A061DID7|A0A061DID7_THECC0Serine/threonine-protein kinase {ECO:0000313|EMBL:EOX92334.1}
TAIRAT1G546105.00E-152Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007932971463343809-
Transcript Sequence

Network for GWHGAAEX017584

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase973794.10E-68
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCMGC_CDK-CRK7-CDK9

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.430
SRR2545915Juvenile tuber3.260
SRP108465SRR5643513five period of Gastrodia elata17.350
SRR5643514five period of Gastrodia elata20.530
SRR5643515five period of Gastrodia elata15.570
SRR5643524five period of Gastrodia elata19.380
SRR5643525five period of Gastrodia elata4.860
SRR5643528five period of Gastrodia elata5.540
SRR5643658five period of Gastrodia elata4.720
SRR5643659five period of Gastrodia elata3.750
SRR5643660five period of Gastrodia elata3.670
SRR5643661five period of Gastrodia elata3.840
SRR5643662five period of Gastrodia elata2.570
SRR5643663five period of Gastrodia elata2.650
SRR5643664five period of Gastrodia elata2.400
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_126.430
SRR6049655Rhizomagastrodiae_C368-T10_good_133.450
SRR6049656Rhizomagastrodiae_C368-T07_good_128.140
SRR6049657Rhizomagastrodiae_C368-T07_good_123.240
SRR6049658Rhizomagastrodiae_C368-T04_good_139.660
SRR6049659Rhizomagastrodiae_C368-T04_good_141.910
SRR6049660Rhizomagastrodiae_C368-T01_good_129.440
SRR6049661Rhizomagastrodiae_C368-T04_good_131.450
SRR6049662Rhizomagastrodiae_C368-T01_good_123.940
SRR6049663Rhizomagastrodiae_C368-T01_good_130.700
SRR6049664Rhizomagastrodiae_C368-T10_good_133.080
SRR6049665Rhizomagastrodiae_C368-T10_good_133.080
SRP279888GastroGastrodia elata tuber 6.37
JuvenJuvenile tuber10.32
Mother_GastroMother tuber of Gastrodia elata 23.71
Mother_JuvenMother tuber of Juvenile 11.72