Detail information of GWHGAAEX017585/evm.TU.scaffold_83.48
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|283779327|ref|YP_003370082.1| | 1.00E-28 | O-methyltransferase family 2 [Pirellula staleyi DSM 6068] |
| KOG | KOG3178 | 4.00E-43 | Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases |
| nr | gi|357504135|ref|XP_003622356.1| | 1.85E-67 | Isoflavone-7-O-methyltransferase [Medicago truncatula] |
| Swissprot | tr|Q6WUC1|6OMT_PAPSO | 2.00E-65 | (RS)-norcoclaurine 6-O-methyltransferase |
| trEMBL | tr|J7MCT6|J7MCT6_ESCCA | 3.00E-67 | O-methyltransferase {ECO:0000313|EMBL:BAM37634.1} |
| TAIR | AT5G54160 | 4.00E-43 | O-methyltransferase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000079 | 3375560 | 3376927 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017585
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module6 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00891.17 | Methyltransf_2 | 140 | 352 | 1.00E-49 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0008171 | Molecular Function | O-methyltransferase activity |
| GO:0008168 | Molecular Function | methyltransferase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 1.940 |
| SRR2545915 | Juvenile tuber | 0.070 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 3.240 |
| SRR5643514 | five period of Gastrodia elata | 2.880 | |
| SRR5643515 | five period of Gastrodia elata | 1.250 | |
| SRR5643524 | five period of Gastrodia elata | 1.770 | |
| SRR5643525 | five period of Gastrodia elata | 0.480 | |
| SRR5643528 | five period of Gastrodia elata | 0.930 | |
| SRR5643658 | five period of Gastrodia elata | 0.420 | |
| SRR5643659 | five period of Gastrodia elata | 0.050 | |
| SRR5643660 | five period of Gastrodia elata | 0.000 | |
| SRR5643661 | five period of Gastrodia elata | 0.000 | |
| SRR5643662 | five period of Gastrodia elata | 0.050 | |
| SRR5643663 | five period of Gastrodia elata | 0.000 | |
| SRR5643664 | five period of Gastrodia elata | 0.000 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 43.600 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 29.130 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 47.040 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 58.770 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 82.160 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 101.950 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 76.970 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 119.160 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 47.740 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 26.990 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 27.200 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 27.200 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.45 |
| Juven | Juvenile tuber | 2.26 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 5.02 | |
| Mother_Juven | Mother tuber of Juvenile | 1.67 |