Detail information of GWHGAAEX017586/evm.TU.scaffold_83.53
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|271963352|ref|YP_003337548.1| | 3.00E-29 | hydroxyneurosporene-O-methyltransferase [Streptosporangium roseum DSM 43021] |
| KOG | KOG3178 | 3.00E-51 | Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases |
| nr | gi|402726341|dbj|BAM37634.1| | 3.79E-80 | O-methyltransferase [Eschscholzia californica] |
| Swissprot | tr|Q9LEL6|6OMT_COPJA | 8.00E-77 | (RS)-norcoclaurine 6-O-methyltransferase |
| trEMBL | tr|J7MCT6|J7MCT6_ESCCA | 1.00E-80 | O-methyltransferase {ECO:0000313|EMBL:BAM37634.1} |
| TAIR | AT4G35150 | 3.00E-51 | O-methyltransferase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000079 | 3665089 | 3667179 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017586
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module6 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF08100.10 | Dimerisation | 27 | 76 | 2.50E-10 |
| PF00891.17 | Methyltransf_2 | 149 | 335 | 1.10E-51 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0008168 | Molecular Function | methyltransferase activity |
| GO:0008171 | Molecular Function | O-methyltransferase activity |
| GO:0046983 | Molecular Function | protein dimerization activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 10.200 |
| SRR2545915 | Juvenile tuber | 0.370 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 20.840 |
| SRR5643514 | five period of Gastrodia elata | 4.600 | |
| SRR5643515 | five period of Gastrodia elata | 2.930 | |
| SRR5643524 | five period of Gastrodia elata | 3.220 | |
| SRR5643525 | five period of Gastrodia elata | 0.530 | |
| SRR5643528 | five period of Gastrodia elata | 0.210 | |
| SRR5643658 | five period of Gastrodia elata | 0.360 | |
| SRR5643659 | five period of Gastrodia elata | 0.000 | |
| SRR5643660 | five period of Gastrodia elata | 0.000 | |
| SRR5643661 | five period of Gastrodia elata | 0.190 | |
| SRR5643662 | five period of Gastrodia elata | 0.060 | |
| SRR5643663 | five period of Gastrodia elata | 0.090 | |
| SRR5643664 | five period of Gastrodia elata | 0.110 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 93.390 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 220.380 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 154.840 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 117.830 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 160.910 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 174.600 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 163.720 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 272.630 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 117.010 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 55.520 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 112.500 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 112.500 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.28 |
| Juven | Juvenile tuber | 46.58 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 3.81 | |
| Mother_Juven | Mother tuber of Juvenile | 4.45 |