Detail information of GWHGAAEX017592/evm.TU.scaffold_83.68
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|268318056|ref|YP_003291775.1| | 5.00E-20 | heat shock protein DnaJ domain-containing protein [Rhodothermus marinus DSM 4252] |
| KOG | KOG0714 | 5.00E-62 | Molecular chaperone (DnaJ superfamily) |
| nr | gi|743877131|ref|XP_010907799.1| | 1.20E-121 | PREDICTED: dnaJ protein homolog 1-like [Elaeis guineensis] |
| Swissprot | tr|Q9LZK5|DNJ19_ARATH | 1.00E-23 | DnaJ protein ERDJ3B (Precursor) |
| trEMBL | tr|E9P1K1|E9P1K1_MUSAC | 1.00E-115 | DnaJ-like protein {ECO:0000313|EMBL:ADW83718.1} |
| TAIR | AT2G20560 | 5.00E-62 | DNAJ heat shock family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000079 | 4543810 | 4546571 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017592
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00226.30 | DnaJ | 6 | 67 | 2.70E-18 |
| PF01556.17 | DnaJ_C | 137 | 296 | 2.60E-37 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006457 | Biological Process | protein folding |
| GO:0051082 | Molecular Function | unfolded protein binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 3.220 |
| SRR2545915 | Juvenile tuber | 2.660 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 25.520 |
| SRR5643514 | five period of Gastrodia elata | 12.120 | |
| SRR5643515 | five period of Gastrodia elata | 9.510 | |
| SRR5643524 | five period of Gastrodia elata | 9.880 | |
| SRR5643525 | five period of Gastrodia elata | 4.100 | |
| SRR5643528 | five period of Gastrodia elata | 2.760 | |
| SRR5643658 | five period of Gastrodia elata | 6.520 | |
| SRR5643659 | five period of Gastrodia elata | 0.230 | |
| SRR5643660 | five period of Gastrodia elata | 0.300 | |
| SRR5643661 | five period of Gastrodia elata | 0.200 | |
| SRR5643662 | five period of Gastrodia elata | 0.350 | |
| SRR5643663 | five period of Gastrodia elata | 0.380 | |
| SRR5643664 | five period of Gastrodia elata | 0.370 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 20.370 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 32.350 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 22.460 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 13.230 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 17.540 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 17.770 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 8.760 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 14.080 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 13.710 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 13.180 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 41.610 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 41.610 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.45 |
| Juven | Juvenile tuber | 0.44 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 4.72 | |
| Mother_Juven | Mother tuber of Juvenile | 0.86 |