Detail information of GWHGAAEX017595/evm.TU.scaffold_84.5
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG2619 | 0 | Fucosyltransferase |
| nr | gi|695066701|ref|XP_009380248.1| | 0 | PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A-like isoform X1 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q9LJK1|FUT11_ARATH | 0 | Glycoprotein 3-alpha-L-fucosyltransferase A |
| trEMBL | tr|M0RJL2|M0RJL2_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P19370_001} |
| TAIR | AT3G19280 | 0 | fucosyltransferase 11 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000080 | 170120 | 195976 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017595
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00852.18 | Glyco_transf_10 | 195 | 356 | 3.10E-33 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00753 | E2.4.1.214 | Metabolic pathways | map01100 |
| Various types of N-glycan biosynthesis | map00513 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006486 | Biological Process | protein glycosylation |
| GO:0008417 | Molecular Function | fucosyltransferase activity |
| GO:0016020 | Cellular Component | membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2.480 |
| SRR2545915 | Juvenile tuber | 3.350 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 1.320 |
| SRR5643514 | five period of Gastrodia elata | 2.420 | |
| SRR5643515 | five period of Gastrodia elata | 1.070 | |
| SRR5643524 | five period of Gastrodia elata | 2.120 | |
| SRR5643525 | five period of Gastrodia elata | 4.260 | |
| SRR5643528 | five period of Gastrodia elata | 3.570 | |
| SRR5643658 | five period of Gastrodia elata | 7.150 | |
| SRR5643659 | five period of Gastrodia elata | 0.840 | |
| SRR5643660 | five period of Gastrodia elata | 0.570 | |
| SRR5643661 | five period of Gastrodia elata | 0.700 | |
| SRR5643662 | five period of Gastrodia elata | 0.530 | |
| SRR5643663 | five period of Gastrodia elata | 0.520 | |
| SRR5643664 | five period of Gastrodia elata | 0.350 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 0.620 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 0.590 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 1.380 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 1.180 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.390 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.540 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.800 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.870 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 1.560 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.730 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 1.660 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 1.660 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.67 |
| Juven | Juvenile tuber | 1.03 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 3.14 | |
| Mother_Juven | Mother tuber of Juvenile | 6.03 |