Detail information of GWHGAAEX017615/evm.TU.scaffold_84.35


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|15596490|ref|NP_249984.1|1.00E-60hypothetical protein PA1293 [Pseudomonas aeruginosa PAO1]
KOGKOG15200Predicted alkaloid synthase/Surface mucin Hemomucin
nrgi|695048798|ref|XP_009412315.1|0PREDICTED: strictosidine synthase 3-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q8VWF6|SSL3_ARATH0Protein STRICTOSIDINE SYNTHASE-LIKE 3 {ECO:0000303|PubMed:10777701} (Precursor)
trEMBLtr|M0SJ95|M0SJ95_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P30810_001}
TAIRAT1G084700strictosidine synthase-like 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008019773101991585-
Transcript Sequence

Network for GWHGAAEX017615

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03088.15Str_synth1812681.80E-30
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0009058Biological Processbiosynthetic process
GO:0016844Molecular Functionstrictosidine synthase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms45.430
SRR2545915Juvenile tuber38.280
SRP108465SRR5643513five period of Gastrodia elata53.050
SRR5643514five period of Gastrodia elata29.490
SRR5643515five period of Gastrodia elata47.010
SRR5643524five period of Gastrodia elata42.950
SRR5643525five period of Gastrodia elata62.400
SRR5643528five period of Gastrodia elata75.350
SRR5643658five period of Gastrodia elata68.650
SRR5643659five period of Gastrodia elata17.940
SRR5643660five period of Gastrodia elata12.080
SRR5643661five period of Gastrodia elata19.800
SRR5643662five period of Gastrodia elata16.240
SRR5643663five period of Gastrodia elata9.520
SRR5643664five period of Gastrodia elata13.300
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_158.850
SRR6049655Rhizomagastrodiae_C368-T10_good_157.220
SRR6049656Rhizomagastrodiae_C368-T07_good_184.770
SRR6049657Rhizomagastrodiae_C368-T07_good_146.170
SRR6049658Rhizomagastrodiae_C368-T04_good_180.750
SRR6049659Rhizomagastrodiae_C368-T04_good_188.000
SRR6049660Rhizomagastrodiae_C368-T01_good_161.600
SRR6049661Rhizomagastrodiae_C368-T04_good_170.400
SRR6049662Rhizomagastrodiae_C368-T01_good_1105.730
SRR6049663Rhizomagastrodiae_C368-T01_good_1108.200
SRR6049664Rhizomagastrodiae_C368-T10_good_1109.360
SRR6049665Rhizomagastrodiae_C368-T10_good_1109.360
SRP279888GastroGastrodia elata tuber 27.58
JuvenJuvenile tuber24.89
Mother_GastroMother tuber of Gastrodia elata 178.58
Mother_JuvenMother tuber of Juvenile 142.38