Detail information of GWHGAAEX017619/evm.TU.scaffold_84.41
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG0902 | 0 | Phosphatidylinositol 4-kinase |
| nr | gi|743771765|ref|XP_010916171.1| | 0 | PREDICTED: phosphatidylinositol 4-kinase alpha 1 [Elaeis guineensis] |
| Swissprot | tr|Q9SXA1|P4KA1_ARATH | 0 | Phosphatidylinositol 4-kinase alpha 1 |
| trEMBL | tr|M0S248|M0S248_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P22400_001} |
| TAIR | AT1G49340 | 0 | Phosphatidylinositol 3- and 4-kinase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000080 | 2349940 | 2417600 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017619
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00613.19 | PI3Ka | 1480 | 1607 | 9.00E-21 |
| PF00454.26 | PI3_PI4_kinase | 1736 | 1797 | 4.90E-07 |
| PF00454.26 | PI3_PI4_kinase | 1804 | 1943 | 2.20E-18 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00888 | PI4KA | Metabolic pathways | map01100 |
| Inositol phosphate metabolism | map00562 | ||
| MAPK signaling pathway - yeast | map04011 | ||
| Phosphatidylinositol signaling system | map04070 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0016301 | Molecular Function | kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 31.030 |
| SRR2545915 | Juvenile tuber | 30.470 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 15.240 |
| SRR5643514 | five period of Gastrodia elata | 14.410 | |
| SRR5643515 | five period of Gastrodia elata | 14.530 | |
| SRR5643524 | five period of Gastrodia elata | 15.110 | |
| SRR5643525 | five period of Gastrodia elata | 12.260 | |
| SRR5643528 | five period of Gastrodia elata | 9.150 | |
| SRR5643658 | five period of Gastrodia elata | 11.130 | |
| SRR5643659 | five period of Gastrodia elata | 15.330 | |
| SRR5643660 | five period of Gastrodia elata | 17.410 | |
| SRR5643661 | five period of Gastrodia elata | 13.590 | |
| SRR5643662 | five period of Gastrodia elata | 11.220 | |
| SRR5643663 | five period of Gastrodia elata | 14.170 | |
| SRR5643664 | five period of Gastrodia elata | 13.160 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 18.900 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 18.920 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 17.790 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 18.360 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 17.300 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 18.770 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 18.260 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 18.650 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 18.670 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 17.300 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 16.940 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 16.940 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 17.87 |
| Juven | Juvenile tuber | 41.45 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 12.28 | |
| Mother_Juven | Mother tuber of Juvenile | 30.91 |