Detail information of GWHGAAEX017628/evm.TU.scaffold_84.56


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695004687|ref|XP_009388760.1|0PREDICTED: glucan endo-1,3-beta-glucosidase 5-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9M088|E135_ARATH0Glucan endo-1,3-beta-glucosidase 5 (Precursor)
trEMBLtr|M0S838|M0S838_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P14970_001}
TAIRAT5G208700O-Glycosyl hydrolases family 17 protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008029794312993552+
Transcript Sequence

Network for GWHGAAEX017628

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00332.17Glyco_hydro_17333504.60E-67
PF07983.12X83704398.80E-15
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH17

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005975Biological Processcarbohydrate metabolic process
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.190
SRR2545915Juvenile tuber0.680
SRP108465SRR5643513five period of Gastrodia elata1.730
SRR5643514five period of Gastrodia elata1.290
SRR5643515five period of Gastrodia elata1.570
SRR5643524five period of Gastrodia elata1.200
SRR5643525five period of Gastrodia elata0.460
SRR5643528five period of Gastrodia elata0.440
SRR5643658five period of Gastrodia elata0.260
SRR5643659five period of Gastrodia elata0.200
SRR5643660five period of Gastrodia elata0.300
SRR5643661five period of Gastrodia elata0.350
SRR5643662five period of Gastrodia elata0.090
SRR5643663five period of Gastrodia elata0.200
SRR5643664five period of Gastrodia elata0.120
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.930
SRR6049655Rhizomagastrodiae_C368-T10_good_13.130
SRR6049656Rhizomagastrodiae_C368-T07_good_14.190
SRR6049657Rhizomagastrodiae_C368-T07_good_13.140
SRR6049658Rhizomagastrodiae_C368-T04_good_12.090
SRR6049659Rhizomagastrodiae_C368-T04_good_11.750
SRR6049660Rhizomagastrodiae_C368-T01_good_13.040
SRR6049661Rhizomagastrodiae_C368-T04_good_14.860
SRR6049662Rhizomagastrodiae_C368-T01_good_13.990
SRR6049663Rhizomagastrodiae_C368-T01_good_12.380
SRR6049664Rhizomagastrodiae_C368-T10_good_11.880
SRR6049665Rhizomagastrodiae_C368-T10_good_11.880
SRP279888GastroGastrodia elata tuber 1.00
JuvenJuvenile tuber0.71
Mother_GastroMother tuber of Gastrodia elata 0.19
Mother_JuvenMother tuber of Juvenile 0.33