Detail information of GWHGAAEX017633/evm.TU.scaffold_84.65


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|427722224|ref|YP_007069501.1|2.00E-66cyclophilin type peptidyl-prolyl cis-trans isomerase [Leptolyngbya sp. PCC 7376]
KOGKOG05460HSP90 co-chaperone CPR7/Cyclophilin
nrgi|695024928|ref|XP_009399695.1|0PREDICTED: peptidyl-prolyl cis-trans isomerase CYP40-like isoform X3 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9C566|CYP40_ARATH0Peptidyl-prolyl cis-trans isomerase CYP40
trEMBLtr|M0SVY7|M0SVY7_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P05580_001}
TAIRAT2G157900peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008035138423528603+
Transcript Sequence

Network for GWHGAAEX017633

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00160.20Pro_isomerase241871.80E-49
PF00515.27TPR_13143472.30E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05864PPID, CYPD Necroptosis map04217
Cellular senescencemap04218

Gene Ontology

GO term OntologyName
GO:0000413Biological Processprotein peptidyl-prolyl isomerization
GO:0006457Biological Processprotein folding
GO:0005515Molecular Functionprotein binding
GO:0003755Molecular Functionpeptidyl-prolyl cis-trans isomerase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.990
SRR2545915Juvenile tuber17.590
SRP108465SRR5643513five period of Gastrodia elata28.170
SRR5643514five period of Gastrodia elata31.190
SRR5643515five period of Gastrodia elata22.990
SRR5643524five period of Gastrodia elata29.510
SRR5643525five period of Gastrodia elata20.660
SRR5643528five period of Gastrodia elata15.620
SRR5643658five period of Gastrodia elata12.670
SRR5643659five period of Gastrodia elata26.430
SRR5643660five period of Gastrodia elata25.980
SRR5643661five period of Gastrodia elata25.340
SRR5643662five period of Gastrodia elata24.800
SRR5643663five period of Gastrodia elata24.580
SRR5643664five period of Gastrodia elata22.890
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_128.810
SRR6049655Rhizomagastrodiae_C368-T10_good_131.460
SRR6049656Rhizomagastrodiae_C368-T07_good_130.630
SRR6049657Rhizomagastrodiae_C368-T07_good_127.050
SRR6049658Rhizomagastrodiae_C368-T04_good_125.680
SRR6049659Rhizomagastrodiae_C368-T04_good_119.890
SRR6049660Rhizomagastrodiae_C368-T01_good_127.530
SRR6049661Rhizomagastrodiae_C368-T04_good_124.880
SRR6049662Rhizomagastrodiae_C368-T01_good_141.310
SRR6049663Rhizomagastrodiae_C368-T01_good_135.350
SRR6049664Rhizomagastrodiae_C368-T10_good_139.130
SRR6049665Rhizomagastrodiae_C368-T10_good_139.130
SRP279888GastroGastrodia elata tuber 25.40
JuvenJuvenile tuber34.65
Mother_GastroMother tuber of Gastrodia elata 13.11
Mother_JuvenMother tuber of Juvenile 18.73