Detail information of GWHGAAEX017641/evm.TU.scaffold_84.73


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|566229978|ref|XP_006371120.1|6.42E-90hypothetical protein POPTR_0019s04280g [Populus trichocarpa]
Swissprottr|Q6K5Q0|GL21_ORYSJ3.00E-82Putative germin-like protein 2-1 (Precursor)
trEMBLtr|B9IPG3|B9IPG3_POPTR2.00E-90Uncharacterized protein {ECO:0000313|EMBL:EEE99752.2}
TAIRAT3G059504.00E-80RmlC-like cupins superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008038189773819708-
Transcript Sequence

Network for GWHGAAEX017641

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00190.21Cupin_1642132.60E-44
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0045735Molecular Functionnutrient reservoir activity
GO:0030145Molecular Functionmanganese ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.370
SRR2545915Juvenile tuber5.060
SRP108465SRR5643513five period of Gastrodia elata773.460
SRR5643514five period of Gastrodia elata840.340
SRR5643515five period of Gastrodia elata481.150
SRR5643524five period of Gastrodia elata702.180
SRR5643525five period of Gastrodia elata3.450
SRR5643528five period of Gastrodia elata1.940
SRR5643658five period of Gastrodia elata4.260
SRR5643659five period of Gastrodia elata1.290
SRR5643660five period of Gastrodia elata2.550
SRR5643661five period of Gastrodia elata3.010
SRR5643662five period of Gastrodia elata2.710
SRR5643663five period of Gastrodia elata2.380
SRR5643664five period of Gastrodia elata3.550
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1813.650
SRR6049655Rhizomagastrodiae_C368-T10_good_12955.760
SRR6049656Rhizomagastrodiae_C368-T07_good_11857.100
SRR6049657Rhizomagastrodiae_C368-T07_good_1410.020
SRR6049658Rhizomagastrodiae_C368-T04_good_1646.280
SRR6049659Rhizomagastrodiae_C368-T04_good_1626.500
SRR6049660Rhizomagastrodiae_C368-T01_good_1186.470
SRR6049661Rhizomagastrodiae_C368-T04_good_1370.780
SRR6049662Rhizomagastrodiae_C368-T01_good_11420.150
SRR6049663Rhizomagastrodiae_C368-T01_good_1734.400
SRR6049664Rhizomagastrodiae_C368-T10_good_13407.990
SRR6049665Rhizomagastrodiae_C368-T10_good_13407.990
SRP279888GastroGastrodia elata tuber 1.74
JuvenJuvenile tuber4.41
Mother_GastroMother tuber of Gastrodia elata 179.68
Mother_JuvenMother tuber of Juvenile 83.38