Gene detail

Detail information of GWHGAAEX017648/evm.TU.scaffold_84.82

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743773108\|ref\|XP_010916886.1\|	2.12E-36	PREDICTED: uncharacterized protein LOC105041621 isoform X2 [Elaeis guineensis]
trEMBL	tr\|A0A068TQ15\|A0A068TQ15_COFCA	3.00E-25	Coffea canephora
TAIR	AT5G64170	9.00E-17	dentin sialophosphoprotein-related

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000080	4144316	4163112	-

Transcript Sequence
>GWHTAAEX017648 CGGAATTGGACCCTGCGGACTACCTACCCCACCCTGGTGCGCCAATTAAAATGAAGCCAGGACGGACGCGCGGGACCCACCGATACTGCCGTCAGATACACCCTTGGCCCCCCCTCCCACCCCCCAAGATTTTTTGAAAAGGAGTTCGGCCCGCCGGAAAGGGAGAGAGAAGGAGAGGGCAGAGGCAAACCAAAGGAGCGAGGGATGAGAAGAAAGGAGAAAGGGTTGTTCTAGGTCTTGTGAGCGCGTTCGGGAGGAATCAGAAGATCCGTTCTACGAATAGGAGCCGTGGGCTTCTCTTCCTGCTGGAGATTCTGGAATCAAATATGAGACTGGATCCAGTCGATTGGCACTGCTTTGGGTCGGGAAAGAGAGAGGAAGAGTGATGTCACTTTGGAAAGGATACGAGATACAGGATATTTTGGGCTATGAAGATAGTGGCGTTAACCATTTTCTTTCTCTTCAAGATGGTGAAAAAGCGTTTGAATCTGTAGCCTTTAATGAATCTCATAAGAAGCCACGATGTGAGTCAATAAATGATACCAAAACATGTATATATCGTGAAGGCTCTACAGATGAGGTTTCTCTACCAAGAATAGATGGAAGAGTTCTTTCATCTGCTCTGAAAGAGGGAGGCTCCAGTATCCTGGATGTTTCATGGCCACTTACATCTGAAATAGATACTCAAGCAATAGATATCACTAAGTGCAGTACAGGAAGCACCATTCTAGATTGCCAAGGGAGTGAAATCTCCTGTAGTGTTCTTAGAGAAGGTGAAATTGGCACAGGAAGCATAACATTGTTCTCAGATTATTATCCTTTTCCTGGGAAGTGCGACCTTGTAAATCAGGAAAAACTTGGTGATGTTTCCTCATCTAATGTTTTGGCTGGTGTACAGACAAAGGACCAAAAGAATGGAGAGGATGATCTGCAATTCTATGATTGTCATAATAATGGAGAATTTGAATATTTTGATAGAATGTTCAGAAACCTTGGTTCCACAGTTGGGCAAGAGAGCACTGTCACCAAAGATGAGACCCCATGGTTTTCATCTTCAAATCGCTTACATGGTATGGAAGATACATTGCAATCAGTCGTGCTATCTTCAGTTTCAGAGACGAGTGCTTTTAACAACAAAACTAGTTCTCATTTACCTGCAATAGCCATTAACGCTGAGATTCCCTCTAGTACAGGCTGTAGTTCTTTTCCAACGTATACTGTCACTGAAAGAAACAATAAATCAGTACTATCTGAACTGGCGTGTGATCATACCGGTCTTGTTGGGAAAAGTTTGGAACTAGAACAGATTGGTTATGGAAGTGGTTGCAGATACCCTAACATGATTTATACTACTCTAAAGGAGCTTTGTACAACAGCAGGAAAGAAAATCAATCCAATTTCAGGATTGACTGTACAAAGCCCATTTAGTGGTTGTAGCTTGATACAGAATGGCCAAGATCAGGATCTTCTCTCTTCTGTCATGTCAGCACCTGAGCATTGTTCTTTTCAAGTTATTTCAAAGGAAAAGCCTTTACCAGAATCTTATGCATCCAATCACTTGCATTCCTACAACTTCCAAGCACTGATGGGCGACAATCTTGCACTGCCACGTGTTCCACCATCAGAAACAACATTAAATGCATCAGTTATAAAATCCAGTGCTTTGCCTGACTATATATCGTCAAATAATCTGTCAATCCATGTTCCTCAATCCATGGGGATTCTACCTGGATCGTTTTCCGTGCCATCAACTCCAATACAGAAATGTGAAAAATTGTATGCATGTCAGAAGTTACCTGCTCCAAGTGATTCTTCAGTTCAAAGAAAATATAAATTTGAATATGAAGTTGAAGTTGATAAAAAAAGGGCCCTAAATCTTCCAGCAGTAAATGTAGGCTCATCAACCTTACAAGACAACTCGTACATATCTGGTTCTTTTCTTGATGACGTGACTGTAAAAGCAGTCAATTTTCAACAGCTTCGGATGAATATTGATCAGCTAGGTGACAGAACTAAGCTGTGCATAAGAGACAGTTTATATCGTTTGGCTAGAAGTGCTGAGCAAAGTCATTACAACTGCACTGGAAACAACAACGCCAACAGTGGAGATAGCCGATCGATTTGGTTTCAGGGTTCCATGGACTCTAAAAGGCCTCCCATCAGCACGAATGCAATAGAGCGTGCTGTGGCATATTTGCTCTTTCACAAGTCCTTGGAGTCCTCCAGCACAGGAACAGCAGACGACTGCGCTTGGTTCAGATCTCCCATCCACATTTCTGGAAAGTGCAAAGAGACGATTTGCCTGCTTCATGAAAAGCCCAATTGATGATGGAGCTTTTGTTGTAACTCAAAGGTGTCATTGACATATTATACTCGATAGGAAATAAAGCATCATATATATATATATATATGTATGTATTCATTTTCTATACATATTTGTGATTCTTACACGTGGCACGCAGGTGCATGAGAGGGCATGCATGAGCCATTTGATTTGTATCATAAATAAAATGTTATGACGGTATAACTATGACTGCTGCATAGCAGCCTTCTGTGGTTTTGTTTCTGGTACCATTATATTGTTATATTTTAGAACAAATATAATAATAGTAATGAAAATAATTAGACAATTATGGTTTGAAATATTATACAGAGGTATTTCTTTGCTAACTGAGATAGTAATTTGATGCAATAATAA

Network for GWHGAAEX017648

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module7

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	38.740
SRP064423	SRR2545915	Juvenile tuber	60.350
SRP108465	SRR5643513	five period of Gastrodia elata	30.180
	SRR5643514	five period of Gastrodia elata	31.810
	SRR5643515	five period of Gastrodia elata	30.150
	SRR5643524	five period of Gastrodia elata	34.060
	SRR5643525	five period of Gastrodia elata	42.340
	SRR5643528	five period of Gastrodia elata	44.040
	SRR5643658	five period of Gastrodia elata	47.280
	SRR5643659	five period of Gastrodia elata	53.110
	SRR5643660	five period of Gastrodia elata	55.110
	SRR5643661	five period of Gastrodia elata	51.700
	SRR5643662	five period of Gastrodia elata	42.000
	SRR5643663	five period of Gastrodia elata	47.100
	SRR5643664	five period of Gastrodia elata	44.750
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	17.030
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	27.750
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	18.850
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	17.230
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	14.830
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	17.690
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	14.190
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	15.840
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	19.130
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	16.640
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	27.480
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	27.480
SRP279888	Gastro	Gastrodia elata tuber	59.69
	Juven	Juvenile tuber	83.99
	Mother_Gastro	Mother tuber of Gastrodia elata	74.73
	Mother_Juven	Mother tuber of Juvenile	112.46