Gene detail

Database	Orthologs	E value	Annotation
KOG	KOG4197	3.00E-46	FOG: PPR repeat
nr	gi\|672166551\|ref\|XP_008803207.1\|	1.65E-85	PREDICTED: pentatricopeptide repeat-containing protein At1g62910-like [Phoenix dactylifera]
Swissprot	tr\|Q0WVK7\|PPR12_ARATH	1.00E-46	Pentatricopeptide repeat-containing protein At1g05670, mitochondrial (Precursor)
trEMBL	tr\|W1PN57\|W1PN57_AMBTC	2.00E-49	Uncharacterized protein {ECO:0000313\|EMBL:ERN08610.1}
trEMBL	tr\|W1PN57\|W1PN57_AMBTC	9.00E-36	Uncharacterized protein {ECO:0000313\|EMBL:ERN08610.1}
trEMBL	tr\|W1PN57\|W1PN57_AMBTC	2.00E-33	Uncharacterized protein {ECO:0000313\|EMBL:ERN08610.1}
trEMBL	tr\|W1PN57\|W1PN57_AMBTC	9.00E-29	Uncharacterized protein {ECO:0000313\|EMBL:ERN08610.1}
trEMBL	tr\|W1PN57\|W1PN57_AMBTC	5.00E-18	Uncharacterized protein {ECO:0000313\|EMBL:ERN08610.1}
trEMBL	tr\|W1PN57\|W1PN57_AMBTC	7.00E-09	Uncharacterized protein {ECO:0000313\|EMBL:ERN08610.1}
TAIR	AT1G05670_2	3.00E-46	Unannotated protein

Scaffold	Start	End	Strand
GWHAAEX00000083	65607	66455	+

Transcript Sequence
>GWHTAAEX017657 ATGCCAGATAAAGGTGTTGTTCCTAATGTTGACACTTTTAATGTTCTGATTCATGGGATTTGCGTGAATGGGAACTTAGAAGAAGGTTTGAGAATTCTCAAAGGCATGGTTAGCAGGGGTCCGAGACCAAACATAAAGCCGTACACCGCAGTATTGCATGCTTTGTGCCGGCGCTGCATGTTTGACGAGGCACTGGAGCTGTTCGATGATTTTCCTAGGCAGGGATTGAGCAGTGATAAGCATATGTTTGGGACTTTGCTCTTTAGTTTGTGCAATGCCGGGAGAGTGGAGGTTGCCAGTAGGTTGTTTTATCAGATGGAATCAAGTGGTTTCAACGATATAGCGGCGTATAATTGTTTGATATGTGGCTACTGTAAACTGGCGAATATGGTGGCTGCCAAGAAGCTGTTTGTAGAGGCACTGGCCAAAGGAATGGAGCCTGATGTGATCATGTATACTACATTGATAGATGGACCTTTTAAGATTGGAGACATCAAAGTGGCACAGGAGCTAGTGAGAGATTTTGGGGAGAGCGGTCTTAAGCCAGATATGATCATGTTTTCTACTTTGATGGAGGGTTTATGTGAAACAGAAAGCTTGGCTGCTGCACTTGAGCTGCTGGGTGAAATTGTGAGGCAAGGCCTTGAGCCAAACTCAGCTATTTACACAATGCTTATATGTGCACCTTGCATGGCCAGAAATTTCGGCAAGACAGTTCATTTTCTTGAAGAGATGGGTTTTAAAGGACTAAAACTTGATGTTAGATCTCTTAGGGTGCTTTTTAGATGGAATGATACACAGCGCAAGCCCTTGGAGTCATGCCAGGAGCCTGTTGCCATTTTCGGATGA

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13041.5	PPR_2	8	57	1.60E-10
PF12854.6	PPR_1	75	107	9.70E-06
PF13041.5	PPR_2	113	158	5.80E-10
PF13041.5	PPR_2	182	230	3.60E-07

Protein Sequence

Gene family	subfamily
--	--

KO	Enzyme	pathway	mapID
--	--	--	--

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	8.870
SRP064423	SRR2545915	Juvenile tuber	5.170
SRP108465	SRR5643513	five period of Gastrodia elata	6.480
	SRR5643514	five period of Gastrodia elata	6.880
	SRR5643515	five period of Gastrodia elata	4.680
	SRR5643524	five period of Gastrodia elata	5.800
	SRR5643525	five period of Gastrodia elata	1.910
	SRR5643528	five period of Gastrodia elata	1.470
	SRR5643658	five period of Gastrodia elata	1.360
	SRR5643659	five period of Gastrodia elata	8.370
	SRR5643660	five period of Gastrodia elata	8.460
	SRR5643661	five period of Gastrodia elata	7.980
	SRR5643662	five period of Gastrodia elata	7.600
	SRR5643663	five period of Gastrodia elata	7.610
	SRR5643664	five period of Gastrodia elata	7.950
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	11.290
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.900
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	8.780
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	9.070
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	9.780
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	7.030
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	9.320
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	12.290
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	10.650
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	10.640
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	7.210
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	7.210
SRP279888	Gastro	Gastrodia elata tuber	12.55
	Juven	Juvenile tuber	7.03
	Mother_Gastro	Mother tuber of Gastrodia elata	5.37
	Mother_Juven	Mother tuber of Juvenile	3.21