Detail information of GWHGAAEX017692/evm.TU.scaffold_86.6
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|283780484|ref|YP_003371239.1| | 4.00E-24 | serine/threonine protein kinase [Pirellula staleyi DSM 6068] |
| KOG | KOG0600 | 0 | Cdc2-related protein kinase |
| nr | gi|743815880|ref|XP_010930474.1| | 0 | PREDICTED: probable serine/threonine-protein kinase At1g54610 [Elaeis guineensis] |
| Swissprot | tr|Q9ZVM9|Y1461_ARATH | 0 | Probable serine/threonine-protein kinase At1g54610 |
| trEMBL | tr|W1NVN4|W1NVN4_AMBTC | 0 | Uncharacterized protein {ECO:0000313|EMBL:ERM99657.1} |
| TAIR | AT1G53050 | 0 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000081 | 653855 | 671446 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017692
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module7 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 143 | 427 | 1.10E-67 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CMGC_CDK-CRK7-CDK9 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.340 |
| SRR2545915 | Juvenile tuber | 0.960 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 2.220 |
| SRR5643514 | five period of Gastrodia elata | 3.120 | |
| SRR5643515 | five period of Gastrodia elata | 1.690 | |
| SRR5643524 | five period of Gastrodia elata | 2.080 | |
| SRR5643525 | five period of Gastrodia elata | 1.520 | |
| SRR5643528 | five period of Gastrodia elata | 0.600 | |
| SRR5643658 | five period of Gastrodia elata | 1.520 | |
| SRR5643659 | five period of Gastrodia elata | 0.920 | |
| SRR5643660 | five period of Gastrodia elata | 0.640 | |
| SRR5643661 | five period of Gastrodia elata | 1.020 | |
| SRR5643662 | five period of Gastrodia elata | 0.670 | |
| SRR5643663 | five period of Gastrodia elata | 0.770 | |
| SRR5643664 | five period of Gastrodia elata | 0.720 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 2.580 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 4.730 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 3.130 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 2.710 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 2.010 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 1.340 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 2.510 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 3.640 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 3.260 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 3.030 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 3.820 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 3.820 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.78 |
| Juven | Juvenile tuber | 3.07 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 1.07 | |
| Mother_Juven | Mother tuber of Juvenile | 0.84 |