Gene detail

Detail information of GWHGAAEX017697/evm.TU.scaffold_86.15

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG2641	Predicted seven transmembrane receptor - rhodopsin family
nr	gi\|672126197\|ref\|XP_008786541.1\|	PREDICTED: transmembrane protein 184 homolog DDB_G0279555 isoform X1 [Phoenix dactylifera]
trEMBL	tr\|M0RIP0\|M0RIP0_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr10P16150_001}
TAIR	AT1G77220	Protein of unknown function (DUF300)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000081	1072505	1121354	-

Transcript Sequence
>GWHTAAEX017697 GGTAGACCCTGCTACGGCGCAGTTGTATTAATTGCAGTTCTCGGCATTATTTTGGAGCTATTCATGTAACAAGGGTCGTCTCCTTATCCGCGCTATAACAGCGGTTGCACAATAGTCCGCTCGAGGAAGGATGCTACGGGTTTAACGAAAGAATAGAACAATCAGGATGCTTGCAGGCGATCGGGAACTCTATCTTGTTGATCCCGACAAGCTTGTAGATTCTGGAACTCTCTCACTGAGCCATTTGTTCTTACTAAGGTGGCATTGATGATGGTTTTCTTTCCATTGTCTTTCCCTTTTTCTGTTGCGGAGTCATCTGGCTTATCTAGGAAAATGCTTTATTTCAACTTGTCGGGGCATTCAAACATACTACTTAGCTGGCCAATTTTAAGTGCAGGCATATTTGTACTGGTTTCAGTAGTTTTGTCTCTATTCCTTGTTATTGAGCATCTCGCTGTTTATTATCTGCCCGAGGAGCAAAAGTTTCTGATTGGCATCATTCTTATGGTTCCTGTCTATGCTGTTGAATCGTTTTTGTCACTGTTGAATTCGAAAGCTGCATTCATCTGTGAAATTATGCGGGACTGCTACGAAGCTTTTGCTTTATATTGCTTTGAGAGGTATTTAATTGCTTGTCTAGGCGGTGAGGAGAGAACAATTAAGCTTATGGAGAATCAGGTTCAAGCCAGTACTAGTATTCCTCTTTTGGAACTTGCCTATGAAAACGGTATTGTAAGGCATCCATTTCCATTGAATTGCTGTATGAGGAATTGGTATCTTGGCCCTGACTTTTATCAGGCTGTCAAAATCGGCATTGTGCAATATATGTTATTGAAGACAATTTGTGCACTCTTGGCTATCATATTACAACTTTTTGGGGTTTATGGTGAAGGGAAGTTTGAATGGACTTGTGGGTATCCCTATCTAGCGGTTGTTTTAAATTTTAGCCAGACATGGGCGTTGTATTGTCTCATACAGTTCTATTCTGTTACTAAGGACAAACTGGACCATATAAAGCCTCTTGCGAAGTTTCTTGTGTTCAAGTCTATTGTGTTTTTAACCTGGTGGCAAGGAGTTACTGTTGCTTTTCTCTTTTCAACTGGAGCTTTTGAAGGCCATTTAGCACAGGAGTTGAAAACACGCATCCAGGATTATTTGATATGCATTGAGATGGGGATCGCTGCTGTTGTACATCTCTACGCTTTCCCAGCAAAGCCCTATAAGTGTGGGGAGAGATGCATTCGTAACGTCTCTGTTTTAGCTGATTATGCATCCTTGGGAGCTCCTCCTGATCCTGATGAAGTTGCAGAAGGAGGGAGGTTAGCAAGGATGCACATTTCTCATTCTGATGGTACTTCAAGACGGACCAATTTCCCCCAAAGTGTCCGTGATGTCGTTCTAGGAGGCAGTGAAATTATGGTGGATGATGTGAAGTTCACTGTTTCTCATGTGGTGGAGCCGGTGGAACGAGGCATTGCAAAGTTGAACGAAACGCTGCATCAGATAACTGAGAGCGTGAAGCAGAAGCAGCAGCACCAGGAAGTGAGAGCTAGGAAGGCCAAGGATGACGCTCATCTCATCCCCATGCGCTTATGGACCAATGAATTCTCTGAGGCACATGATATCATTTCTCAGGGAAGTTTTAGCGACAGTGGACTCCTCAGCAAGAAAAGATTCCGCAATCTCGCTCACACGTAGTGCAGCCGCTGGCAGTGCCTGCTTCTTGCTATACAATTCTGGGCATGCTGCAGAATTCATTCTTTTGGTAAAAATTAGTGTTAGATTTGTAAATTGGGAAGATTTGACTGCATTGCAGATCCCCTTCTTTGGTGGTTTCAAAGGCCATGTCTTCTCCTGTTCCAGAATCATCTCAGGTTTCTTAAAATCACTTTTTTATATTTTGGATTGCACTAAAAATTTTAATGTTTTTGTTTAATTTAAGGCGTAAACAGACGGTTTCATTAATTTATTTTATTTTATTTTAAAGGGAAATTGAGTAACTTGGAATTATGGAGGGGTTTGGGTTTTGTAAATGTAATGGAAAATCCTTAGTTGTTCTTTCTTCCATTACAATTAGTGAATCCTTAGAGAATCAATTAGTGTCCAAATGTACATTTTTGAAGCATGAACATCGGAATAAAGAGTTGTAAATTTGTTCAATTGAAATCTCTTTATGGGTGATGGGAAGTGTAAGAGCGCCTCTGTCCTTTATAAGATGCTTTCATTGTGCCTCTATTCCTTTATAGA

Network for GWHGAAEX017697

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03619.15	Solute_trans_a	41	318	1.30E-89

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	39.170
SRP064423	SRR2545915	Juvenile tuber	33.470
SRP108465	SRR5643513	five period of Gastrodia elata	25.690
	SRR5643514	five period of Gastrodia elata	23.990
	SRR5643515	five period of Gastrodia elata	21.640
	SRR5643524	five period of Gastrodia elata	22.420
	SRR5643525	five period of Gastrodia elata	31.470
	SRR5643528	five period of Gastrodia elata	26.320
	SRR5643658	five period of Gastrodia elata	27.690
	SRR5643659	five period of Gastrodia elata	21.280
	SRR5643660	five period of Gastrodia elata	25.010
	SRR5643661	five period of Gastrodia elata	21.760
	SRR5643662	five period of Gastrodia elata	25.310
	SRR5643663	five period of Gastrodia elata	25.260
	SRR5643664	five period of Gastrodia elata	26.480
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	30.890
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	25.430
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	29.670
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	33.890
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	37.460
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	37.320
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	33.050
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	31.540
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	22.430
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	25.920
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	22.580
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	22.580
SRP279888	Gastro	Gastrodia elata tuber	25.21
	Juven	Juvenile tuber	29.06
	Mother_Gastro	Mother tuber of Gastrodia elata	22.50
	Mother_Juven	Mother tuber of Juvenile	26.85