Detail information of GWHGAAEX017698/evm.TU.scaffold_86.16


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG29977.00E-163F-box protein FBX9
nrgi|672116640|ref|XP_008781490.1|0PREDICTED: F-box protein 7 isoform X1 [Phoenix dactylifera]
Swissprottr|Q9XI00|SKI32_ARATH2.00E-163F-box protein 7
trEMBLtr|M0T4X2|M0T4X2_MUSAM2.00E-179Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P07230_001}
TAIRAT1G217607.00E-163F-box protein 7

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008111575451200934-
Transcript Sequence

Network for GWHGAAEX017698

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12937.6F-box-like611068.10E-14
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms35.450
SRR2545915Juvenile tuber29.100
SRP108465SRR5643513five period of Gastrodia elata18.670
SRR5643514five period of Gastrodia elata18.320
SRR5643515five period of Gastrodia elata22.030
SRR5643524five period of Gastrodia elata19.530
SRR5643525five period of Gastrodia elata26.060
SRR5643528five period of Gastrodia elata25.060
SRR5643658five period of Gastrodia elata31.600
SRR5643659five period of Gastrodia elata21.500
SRR5643660five period of Gastrodia elata23.920
SRR5643661five period of Gastrodia elata22.500
SRR5643662five period of Gastrodia elata27.520
SRR5643663five period of Gastrodia elata23.510
SRR5643664five period of Gastrodia elata22.470
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.430
SRR6049655Rhizomagastrodiae_C368-T10_good_121.730
SRR6049656Rhizomagastrodiae_C368-T07_good_120.090
SRR6049657Rhizomagastrodiae_C368-T07_good_126.660
SRR6049658Rhizomagastrodiae_C368-T04_good_128.780
SRR6049659Rhizomagastrodiae_C368-T04_good_131.780
SRR6049660Rhizomagastrodiae_C368-T01_good_124.750
SRR6049661Rhizomagastrodiae_C368-T04_good_125.730
SRR6049662Rhizomagastrodiae_C368-T01_good_116.890
SRR6049663Rhizomagastrodiae_C368-T01_good_118.100
SRR6049664Rhizomagastrodiae_C368-T10_good_119.320
SRR6049665Rhizomagastrodiae_C368-T10_good_119.320
SRP279888GastroGastrodia elata tuber 42.22
JuvenJuvenile tuber42.32
Mother_GastroMother tuber of Gastrodia elata 44.36
Mother_JuvenMother tuber of Juvenile 47.47