Gene detail

Detail information of GWHGAAEX017700/evm.TU.scaffold_86.20

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|695034824\|ref\|XP_009404878.1\|	PREDICTED: protein TPLATE-like [Musa acuminata subsp. malaccensis]
Swissprot	tr\|F4J8D3\|TPLAT_ARATH	Protein TPLATE
trEMBL	tr\|M5WAC9\|M5WAC9_PRUPE	Uncharacterized protein {ECO:0000313\|EMBL:EMJ10271.1}
TAIR	AT3G01780	ARM repeat superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000081	1506710	1540912	-

Transcript Sequence
>GWHTAAEX017700 CACCGCTTGGCCACAGGAAATGTATAAGGTGCATGGGCGTGAACATGAATGTATGATTGATGCAGAGCCTAGAGTAGCAGAACAACAAGCCATGATGCAAGGATGAAGTGCATACGAGGAACGAGGTAAGAGCATGCACAAATCGAGGCCAGGGTGTGGTGCAATATACAGTATGCATGAGTCGATTCGGGGTGGGTATTGGTGTAGAAAGGGGATGTGGACAAGAACTGAACCCCTCAAAGCGGGCTAGCCCATGAGCAAGCCACGACGCAATGCAGGACATGATTTAGAGGTGCATTGTAAAGCTCTTTGTTTTACTAAGGAGGTGGCACCAATATCAATATCAAAAGTGATGTGAACACCATTTAATTTGAAGGTCTGGATTTACTAATTCCGCAGACAAAACGCGCTAGCATCTGGCGATGGACATCCTATTCGCGCAGATCCAAGCGGATCTCCGCTCCAACGACGCCCTCCGGCAGTCCGGGGCCCTACTCCAGGCGCTACAGCAGTCGGCTGCCGGGCGCGACATATCCGCCGTTGCCAAGTCTACCGTAGAAGAGATTCTCGCTTCCCCAGCCTCCGCAGTCTGTAAGAAGCTTGCTTTCGACCTCATTCGTTCCACACACCTCACCCCCGATCTCTGGGAGACTGTATGCTCCAGCGTCCGCTCCGACCTCGACTTCCCCGATCCTGATGTCGCTGCCGCCGCAGTTTCCATCCTCTCCGCCATCCCTTCTCATCGCCTTTCCAAGCTCATCTCTGATTGTCACAAGGAGATCTCGAGCTGCTTTGATTCCCCTAGCGACAACCTGCGATTTGCTGTCACGGAGACTCTTGGATGCATCCTCGCTCGAGATGACCTCGTTCTCCTCTGCGAAAACAGCGTTGGCCTCCTCGATCGCGTTTCCAACTGGTGGATGCGAATTGGGAACAATATCCTTGACCGGTCGGACTCTGTCTGCAAGATCGCCTTTGAATCTATTGGCCGATTATTCCAAGAATTTGAATCCAAGAGAATGAGCCGTCTTGCTGGGGACAAGCTCATTGATAGCGAGAATTCGCTGGCCATACGCTCCCACTGGGTCGTGAATGCCATTGGTCTCGTATGGAAGAAGAGGAGCATTCTGATACAGAGGTCAATGATTCTTCCAGTAGAAAGCTTTAGGATTACGGTCTTTCCTCTTGTTTATGCCGCCAAGTCTGTGGCTTCTGGTGCTTTGGAGGTGTTTCGGAAACTCTCTAAGTCAGGGGGAAGTGTAGTTGATACCCTAAGTGCGGAGAAGATTGTTGGAGTTTCTGATGTAGTCTCACATCTTCTGCCATTTTTAAGCTCACTGGATCCCCCGCTGATATTTGAGGTTGGGATCAATATGTTGTCGTTGGCTGATGTTCCTGGTGGGAAACCGGAGTGGGCTTCGGCTTCCATTATTGCAATTCTCACACTTTGGGACAGGCAGGAGTTTTCTTCGGCCAGAGAAAGCATTGTTAGAGCTGTCGTCAACAATCTCCACCTCCTTGATCTTAGCATGCAGGTTTATTTGTTTAAGAGGCTTCTTCTTATGGTAAAAAATTTAAGGGCAGAGTCAGACCGCATGCATGCTTTGGCATGCATTTGTCGCACAGCTCTTTGTGTAGACCTCTTTGCAAAGGAAAGTGTGCGAAGAGGTCAGAAGCCTCTTCCAGGCACAGACATTACTTCACTTTTTGAAGATGTGAGAATTTTTGATGATCTGAATAGTATATCAAGTAAAAGCTTATTTAGAGAGGAGCTTGTTGCTTCACTGGTGGAAAGCTGTTTCCAATTATCTCTACCACTGCCTGAACAGAAAAATTCGGGTACTGAGAGCAGAGTTATTGGTGCTTTGGCGTATGGAACTGGCTATGGTGCACTCAATTGGACAGAGTCAGCCTTAGAGGTTGTGGAAGTTTGTAGGCCTTGTGTTATGTGGGACTGTGATGGGCGAATTTATGCTATAGACTGCTATTTGAAGTTGCTTGTAAGACTTTGTCATATATATGATACAAGAGGAGGTGTTAAAACAATTAAAGACGGTGCTTCTCAGGACCAGATTTTGAATGAAACTCGACTACGGAACTTACAAGTACAGCTTCTCAAAGATCTACGCGAGGTTCATACGCCAAGAATCTGTGCACGCTTGATTTGGTCTATTGCAGAACACTTTGATCTTGAAGGTCTGGATCCACTATTAGCTGATGACCCAGAGGACCCACTCAACATCTTTATATCAAGCATGCACAAGGTATTATTCAGTAGTGATGCATCTGCAGTCACTTCTAACAGGCTTCAAGATGTGCAAGCTGTCCTACTGTGTGCTCAGCATTTAGGATCACGGAATGCAAGAGCTGGCCAACTTTTGAGTAAAGAGCTTGAAGATTTTAGAAATGACGCGTTATCTGACTCTGTTAACAAGCATCAGTGCCGCTACATTTTGCAGATTATCAAATACGTCACCATGTATCCAGAGAGAAGATGGCCAGGTTTAGTTGAGTCAAGTGGGGATTACCCCTTTAGCCACCATAAACTCACAGTTCAGTTCCACGAGGCATCTGCAGCACAAGACAGAAAACTGGAAGGTTTGGTACACAAAGCTATTCAAGAATTGTGGAGGCCAGAACCCAGTGATTTAAGCCTTCTACTAACAAAGGGCCTCAACTTTACTTATCTCAAAGCTCCTCCAAAGGCTCAGACACTCACTGGTAGTAGCGATCCTTGCTATGTGGAAGCATACCATTTAGCCGACCCAACTGATGGGAGAATTACGTTGCATTTAAAGATTCTAAATTTGACTGAACTAGAACTAAACAGGGTGGATATCAGGGTTGGACTTACTGGAGCTCTGTATTTCATGGACAACTCTCTAGGAGTGAGGCAGCTACGGAATCTTGTTTCCCAGGATCCAGTTCTTAGTAGTGTAACACTGGGTATCTCACACTTTGAGAGATGTGCACTATGGATTCAAGTGCTGTACTATCCGTTCTATGGAATTGGAAATTTTGACTATGAAGGAGATAGTGGCGAAGACGATGTTCAGATTACAAGGCAAAAGCGAAATTTGAAGTCTGAACTTGGAGAGCCAGTGATACTGAGATGCCAGCCATATAAAGTTCCAATAACTGTCCTCCTTTTGCCTCACAATTGTTCTCCAGTTGAATATTTTCGTCTGTGGCCAAGCTTGCCAGCTGTTATAGAGTGCACAGGAACCTACACATATGAAGGTAGCGGCTTTAAGGCTATTGCTGCTCAACAGAGTGGTGCCTCACCATTTCTTAGTGGGTTAAAATCACTCTCGTCAAAACCTTTCCATCAAGTTTGCTCTCACCTTATTCGCACGGTGGCTGGCTTCCAATTATGCTTTGCTGCAAAAACTTGGTTTGGCAGCTTCTTAGGCATGATGATTTTTGGGTCCAGTGAAGTGAGTAGAAATGTAGACTTGGGTGATGAGACAACGACAATGATGTGCAAATTCGTTATGCGATCCTCCGATGCTTCCATAATTAAGGAAATAAGTTCAGATTTACAGGGCTGGCTGGATGATATCACCGATGGTGCCGTGGAGTATATTTTGGATGAGGAGGTGAAGGCAACTGCTGCCGAGAGGCTTAGAATCTCCATGGAAAAAATTGCACTGCTTAAAGCAGCCATGCCTCCCCCTCAGATTCCGAAGGCTGAAGAAGAAGAGGAGGTGATGGATGCAGAGGAAAGAAAGAAAATTAAAAATGACAAAATTGATGAGAATGAGATTCATAAAGAACCTTCAACCCTATCAACCCTTACAGCAGACGAAGCGGAGCACAGTGCCCTTCAAGCTGCAGTTATTCAAGAATGGTACATGTTATGTAAAGAGAAGCCTGTTGCTGTTGCCTGAGGCTTAAACGGGTGTTCAAGGAAAAGCATCTGTTGTCACAAAAGCTGAAACTTATTTACTGTCACAAGCGCTACCCCATTGTTGCTATCCTAGCACCACGGCTGTAGCACCCTGTCGTTGTGATCCATGAAGCAGCTCCCGATCTTTCGGCTCGTCAAAGAGGGTTGCATCACCTGCTGGCAAGCCTCAATAGTTGATGAATGGCTACAGTTTGGATGTAGATCAACTGCATTACCATCAATCATTTTCCAAACAAAGCAAGCGAATATCTATAATGTAATCTATTTGCCGCTTGAATTTTGGAAACATATTTTCCGTAGCTACGATGAACTGGGCAGTGCATTATCCTCATCTTGTTATCATATATTTTGCTTATACGTATCGTTGATAGTGGATCAGCTTTTATTTTGCTTGTCTTAATTTATTTGTTAGCTG

Network for GWHGAAEX017700

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX017700
MDILFAQIQADLRSNDALRQSGALLQALQQSAAGRDISAVAKSTVEEILASPASAVCKKLAFDLIRSTHLTPDLWETVCSSVRSDLDFPDPDVAAAAVSILSAIPSHRLSKLISDCHKEISSCFDSPSDNLRFAVTETLGCILARDDLVLLCENSVGLLDRVSNWWMRIGNNILDRSDSVCKIAFESIGRLFQEFESKRMSRLAGDKLIDSENSLAIRSHWVVNAIGLVWKKRSILIQRSMILPVESFRITVFPLVYAAKSVASGALEVFRKLSKSGGSVVDTLSAEKIVGVSDVVSHLLPFLSSLDPPLIFEVGINMLSLADVPGGKPEWASASIIAILTLWDRQEFSSARESIVRAVVNNLHLLDLSMQVYLFKRLLLMVKNLRAESDRMHALACICRTALCVDLFAKESVRRGQKPLPGTDITSLFEDVRIFDDLNSISSKSLFREELVASLVESCFQLSLPLPEQKNSGTESRVIGALAYGTGYGALNWTESALEVVEVCRPCVMWDCDGRIYAIDCYLKLLVRLCHIYDTRGGVKTIKDGASQDQILNETRLRNLQVQLLKDLREVHTPRICARLIWSIAEHFDLEGLDPLLADDPEDPLNIFISSMHKVLFSSDASAVTSNRLQDVQAVLLCAQHLGSRNARAGQLLSKELEDFRNDALSDSVNKHQCRYILQIIKYVTMYPERRWPGLVESSGDYPFSHHKLTVQFHEASAAQDRKLEGLVHKAIQELWRPEPSDLSLLLTKGLNFTYLKAPPKAQTLTGSSDPCYVEAYHLADPTDGRITLHLKILNLTELELNRVDIRVGLTGALYFMDNSLGVRQLRNLVSQDPVLSSVTLGISHFERCALWIQVLYYPFYGIGNFDYEGDSGEDDVQITRQKRNLKSELGEPVILRCQPYKVPITVLLLPHNCSPVEYFRLWPSLPAVIECTGTYTYEGSGFKAIAAQQSGASPFLSGLKSLSSKPFHQVCSHLIRTVAGFQLCFAAKTWFGSFLGMMIFGSSEVSRNVDLGDETTTMMCKFVMRSSDASIIKEISSDLQGWLDDITDGAVEYILDEEVKATAAERLRISMEKIALLKAAMPPPQIPKAEEEEEVMDAEERKKIKNDKIDENEIHKEPSTLSTLTADEAEHSALQAAVIQEWYMLCKEKPVAVA

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	28.710
SRP064423	SRR2545915	Juvenile tuber	38.480
SRP108465	SRR5643513	five period of Gastrodia elata	29.160
	SRR5643514	five period of Gastrodia elata	23.620
	SRR5643515	five period of Gastrodia elata	26.360
	SRR5643524	five period of Gastrodia elata	26.620
	SRR5643525	five period of Gastrodia elata	21.290
	SRR5643528	five period of Gastrodia elata	18.340
	SRR5643658	five period of Gastrodia elata	23.000
	SRR5643659	five period of Gastrodia elata	33.690
	SRR5643660	five period of Gastrodia elata	34.790
	SRR5643661	five period of Gastrodia elata	33.480
	SRR5643662	five period of Gastrodia elata	31.040
	SRR5643663	five period of Gastrodia elata	33.110
	SRR5643664	five period of Gastrodia elata	32.170
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	30.770
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	27.850
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	29.270
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	32.210
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	31.900
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	36.670
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	33.140
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	34.490
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	31.110
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	31.650
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	26.690
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	26.690
SRP279888	Gastro	Gastrodia elata tuber	33.79
	Juven	Juvenile tuber	46.36
	Mother_Gastro	Mother tuber of Gastrodia elata	23.88
	Mother_Juven	Mother tuber of Juvenile	42.52