Detail information of GWHGAAEX017726/evm.TU.scaffold_86.54


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|645277164|ref|XP_008243636.1|2.71E-39PREDICTED: transcription factor VIP1 [Prunus mume]
Swissprottr|Q04088|POF21_ARATH3.00E-32Probable transcription factor PosF21
trEMBLtr|M5W6S2|M5W6S2_PRUPE1.00E-39Uncharacterized protein {ECO:0000313|EMBL:EMJ02490.1}
TAIRAT2G313709.00E-32Basic-leucine zipper (bZIP) transcription factor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008126532162657495-
Transcript Sequence

Network for GWHGAAEX017726

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00170.20bZIP_152991.90E-10
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybZIP

KEGG pathway

KO Enzyme pathway mapID
K20557VIP1 MAPK signaling pathway - plant map04016

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms25.150
SRR2545915Juvenile tuber12.130
SRP108465SRR5643513five period of Gastrodia elata1.890
SRR5643514five period of Gastrodia elata2.610
SRR5643515five period of Gastrodia elata3.500
SRR5643524five period of Gastrodia elata5.120
SRR5643525five period of Gastrodia elata4.540
SRR5643528five period of Gastrodia elata8.140
SRR5643658five period of Gastrodia elata6.160
SRR5643659five period of Gastrodia elata2.400
SRR5643660five period of Gastrodia elata2.010
SRR5643661five period of Gastrodia elata3.030
SRR5643662five period of Gastrodia elata4.500
SRR5643663five period of Gastrodia elata1.530
SRR5643664five period of Gastrodia elata3.120
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.760
SRR6049655Rhizomagastrodiae_C368-T10_good_13.040
SRR6049656Rhizomagastrodiae_C368-T07_good_110.790
SRR6049657Rhizomagastrodiae_C368-T07_good_12.650
SRR6049658Rhizomagastrodiae_C368-T04_good_17.530
SRR6049659Rhizomagastrodiae_C368-T04_good_19.760
SRR6049660Rhizomagastrodiae_C368-T01_good_17.420
SRR6049661Rhizomagastrodiae_C368-T04_good_116.890
SRR6049662Rhizomagastrodiae_C368-T01_good_15.560
SRR6049663Rhizomagastrodiae_C368-T01_good_13.850
SRR6049664Rhizomagastrodiae_C368-T10_good_14.040
SRR6049665Rhizomagastrodiae_C368-T10_good_14.040
SRP279888GastroGastrodia elata tuber 1.52
JuvenJuvenile tuber3.58
Mother_GastroMother tuber of Gastrodia elata 21.19
Mother_JuvenMother tuber of Juvenile 26.59