Gene detail

Detail information of GWHGAAEX017730/evm.TU.scaffold_86.58

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672116931\|ref\|XP_008781639.1\|	1.49E-16	PREDICTED: neurofilament medium polypeptide [Phoenix dactylifera]
trEMBL	tr\|A0A061FHE8\|A0A061FHE8_THECC	7.00E-10	Uncharacterized protein {ECO:0000313\|EMBL:EOY16740.1}

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000081	2867258	2872691	+

Transcript Sequence
>GWHTAAEX017730 ATGGAGCTGGAATTAGGAAGAACAGGAGATCTAAGCGGCGCCTTCGCTTCCACAGAAACAGAGGCCTATTTCATCGTCGGCGCTCATCTACCAGGTTTCACAAAAGATGAGATCCATGTTGTTATGAACGAGGAAGAGAAGCTGATCAGTGTCAGGGGAGAAGGCCACATTGCTTCCCAGGAGTCTCTGATGGCCAACAGAGTAGCCATTACTAGAAAAGTGTCGGTTGAAAGTTTTGACAGGAAGTTTGCGGTTCCTCAGAATGTGAACTGGAGTGGCATTGATGCATGGTTTGACGAAGGCCGGAGCATTCTTTTCATTTCAATTCTCAAATTGTTAGAAGCCCATGAAAAGGATTCAGAGAATGCGGTGCGTCAACAGCAAGACCAAGTAACGCAGGAATTTAGCAATCTTACAGGAGAGAAAGCCACAACCAAGGAATTGCCAGAGCACAAAGAACCTCGACCTCTTAAGGATGGAAAGCCTCCATTAGAGACTCCCAGAGGAGTAATAGAAACCAAACATTCAGCTAGATCACAAGTAACAACGGAAGAAATACAAACAAATGAGCAGGAAGTGAAGGAACGCAAGGAAAAGCCCGCAGCAGTGCAGATGCACGAGGAATCCAAAGCTGCAGAATTGCCCGACAAAGAACTAAACGAACAATGGCTTCATGAATTCAAGAAAGATGAAGATGGGCAACAAAATGATCCAGATATAAAGGTGTCCAAAACCAGCCAGACAATCGAGCACAAAGAATTGTCACTAGAACCACAGTCAGAAAAGACAAATAAACCACCTATAAAACCACCAAAAGAAGAAAAAGAAGTAAAGCCAGAGTCAGAACAACCAGAAAGGCATGAGGAACAAGAGCAGAAGACGAGAACAGCACTATCGCGTGAGGAGGCCAAGAACTTGAAGTCTCAAAGACCAAACGAACCTGGGCAAAAACATGATGTAGAAACGCAGGAACATAACAAGCTCACAGTAGCATCAACATATGAGGAGTCTGAATCTGTCGGATTGAAGGAGGAGAATCAAGAATCAGCGCTTCGTGCACCCAAAGAGAATAAAAAACACTTGAGGATGATAGCAAGCATGAAGACAACCAAAATCAGAAAATCTCAACCGCTCCATCAGGAACAAACAAAAAATACACAAAATAATGTTAATCATTCAGTTAAAGAACTGACAAAACAAGAAGAACTAGAAAAGGATGAGCAAGAAGAAGAAGAAGATGGTGCAAAACGGCAGCTACACCAGCAAGAAGGGAACGAACCCTTGGTACGCAGTAAGTCTGCCATACACCCACCATATAAAAAAGACAACACAACGCAATCAGCAAAACCAAACGATGCAGACAAACAACAAAGTCCTAAAGTCAGTGAAACGGTTCAAGTACTAATAGCTGCACCAATACAATCAGGAGAACCGCGGGAACAATCACAACAACAGCAAGAAGCCGAGGAACTGGAAGGGCGTACAGTAGTGCCTACTTGTCAGATGCCAGGAGCCACAGCACCTGATCAAGTGCTGGAAGATGAACATTGTCAATCAGAACGACTACAGAAAGAATTTCAACAGCATGAGCAAGAATTGCAAAAGCCACAACGGATGGGTTTTGAAAAAGTCGCATTCCCCACCAAAAAGACCTTTCGACAAGAGAAAGAATCACAGCTTCAACTAGATCAAGGAATAATGAAACTTACAGTTGAGAAATCAGCAGGAGAAGAGCAAAACCGACTTCAAGAAGCTGCAGAGCCAACACAACTAAAAGATAAGACTCCAATCAGCACACCCGGTCAAGTGTTGGAAGCTCCACAACATATTCAATCAGACCTGCATGACAAGTTAAAACACAATAAGCAAGACGCACCGGTAGATAAGGAGCCTACAGTAGCGCCAGCATCAGAAATGCCAAATGCTGCTAATCTGCAACAGAACGAAGAACAAAAAGCACATGCTCATGAAAACCATGAAAGTGAAGAACACCGATGGGAGAATTCTAACAGAGATGCATCAAAAACCAGAGTGTTACAAGACTTGAAAATATATGAAGATTTTAAGCAAGGAGATGAAGAAAATAAACAAAATGACGAAAAACCAATAGTTAAACTACATAATGATCCAATGGAAGTTGGGAAACCAAAAATTTTAGAAGGAGAAAAAGAGGCAATAGCAGGGGTAAAGCAAGAAATAGAGCAGGAAACAACTGAATGCAACAAGCCTATTATACAGCCACACAATAAGGAAGTTGCTGCCATTATATTTACAAAACTAACAAAACGTGAGAAGATTCAATCAGAAGATACAAAGCAAGACTTATTCAAAGCAACAGATTCTATGTTAGAAGGTGCACCACAGATTCGATCAGAAGATATGAAGCAAAAATTAGAACAACATCAGGAAGAAGTGCAGGAAAATGGGAGGTTAATATCAACATACGAGAAGCCTAAAGATGCTGGGTTGATGGATAAGGAAGAATTAAAGCAAATGTTTCATCAACTCAATGAGGACGGAAACGCAAAAAAGGTAAAACATAAACTAAACCAACCAGAACAAGAGAATTTGGAATGCAGGAAGCCTACACAGTCACCATCTGAGAAATATAATGCTACACAATTAGCAGAATCGAAAGAAACAGATCACAGACAAAGATTAGATGTCAGGAGATTGATTAAAGAACCAGAAGCTGCACAAGTTCAATCAAAAAATCATGACCAATTACAGCATCAAGAGCAAGAAGTACAGGAACATATAAAATCTAAAGTAGTGCCAACATTTGAGAAGTCTCAACCCATTCCATCGGATCAACCGACAGAAGAACATTTTGAAAAAAAGATTCAACAACATGAACACGAAATAAAGAAACAAGAGAAGTCAAACACCCTAGTGCCAACTTGTGAGAAGGATAATCAAGGAAAGGAAGAACCAAAACTGGAACTAAAGGAATTCCAGGAAGATAAAAAACCCCAAGGGATTGGTCCTGATATAGACACATTTCTGACCAAAAAATTGCTCAATTTAGAGGAAGAATCAAGCCTTCTCCTGCAAGAAAACAAAGTATTAAAACAAGAACCGGAGAAACCAATACGGAAAGCATACAGTGCCCTTCAGGAAGCTGGAGAACAAACACGACCTGAAAATGCAGAAAATGATGGAGAAAACGAAGAGGCCCAGGTCAAAAAGAGTGTTGGAAAGTCAACATACAAGAACAAAATAGAGAGAGAATTTCAGGACACTGCAGAAGAAGGTCATGACATTGAGAGTATTGTAAAATTACAGGAAAAGATTAAACAAGCCAAACAATTACCAAAACCAATGGTAGAGCAAATAGAATCCAACGAGCATCACGAACCAGCAACGGGGACGCCCTTTAAAATTCCGCATATGGTAGCCTTCAAAGCCCCAAAAATACTAGAGCTCGATACTCCTAAGGCACCAATTACCGAGGGTGTACCACAAATGCAAGAAATATATCCCTTCAAAGAATCAAAACAGTTTGAAATGCCTCCATTTGGCTCACCATCTAAAGCCCTAGACATAAAAGAGCATAGACCACCACCATTAGAACAAGAGCATGGGATAGAAAATAAAGCCAAAAGCCCTAAGTCACATCAAAGAAAAAAGAAAACAGAACTACAAAGAGAAATGAAGAGTATTGACTTGAATTACAAAGAAGAAATTGAGAAAGAGCGTCAGCCAAAAACTGATGAAAGCTTCAAACATGAGATCATCATGAATTCACCAGTAAAAAAGCCAAATAAGGAGATTCAGAAACCTAAGTTCGAGAAAGAGATGGATGAATCGATGATACTTAAGCAGAAAATATTACAAACAGAGGAAGGAGAGACGTCAAAATCTCAGGGATTCACTACTATGAAGAAAACAGAAAGTAAATCAGTGTTACAAGCACAAGAATCAGATTACGATCAAGAACTCATATACAAGAAACCTGCAGAAGTGTCATCCTTCCATGTATCAGAGGTTGCAAACTTGATAAGACCAGAAAAAGAGCAAGAATCAGGAGAAAAAGATGCATTGTCATACAAGAGAATTGAGCCAGGGAACACTCGAGGGAAAGAACAACTAAGAGAGCAGATTAGAAAGCCAACCAACCCGGAAGAAGAAACTCCACCGTTAGAACCAGACGCAAAGAAAGTCAAGATTCCAATAACAGGGATGCTAAAAATCATATGGGCGCCAGAACCAGAGGATTCAAATAAAAAGCCTGAAAAATCGTTGCAATTCAAACCGCCCAAGAAAGTGGAAGCACAGGTGAAAGTGTATCTTATTGTGGAGGCTGAGCAACCTGATACACCGGCAGTAGAAAAAACAAAAAGAGAATCACAGACTACTGAACTGGAAAAGTCAACAACACGGAAACAACCATTAAAAGGTAAGCAACTAAAGGAGATCGCACCACCAGAGATTCAACAATACATGGAGGAAAATAAGAAAGAGCAATCGATACTAGAGCTAGCAGAACAACTCAAACTATTGAAAAAAGAAGCACATAAAATAGTGAGTGCTGCCGATCAGGAGCTAGCACGCCATGGAGTAGTACTAGAACCACAAGATAAAGCAGAACGTAAAGAACATTTTGTAGAAACAGTACCGGAACAAAAGTCTTACCAATTGAATGAAGGGAAACACGATATTGAATCACCAAAACTACAGATACCTCCATTATTTCCTATTGAACTCGAGGATAAAATAGTGCCAGAACGTTATAAAATCGCAGTGGAGCGACATAAACTACAGCCTAGAACACAGGGTACAACGAAGTTAGGATCATCGCTCCCGCTATCTCCCGAGAACGATGTCATAGAACATGAACGGCCTTCCATGATTCAAACGGAATTGCAACCTAACAGCGATCGTCAAAAACATAATGAGCAAAATACGGCAGGGTGTCAAACACCGGAATATGAAGAATCAACAGCATTGCAAGAAGGACAAACCAACGAAAAACTAGCGCCACGTAAAGCACACGAAGAAAATGATTGTCCAGTTGAAAACGCGCCGCGCAAGGTCTCCGATGTTTCGCAGCAGCTTAAAATATGCGAACTGGAACATCAACAATATCTACTCAAAGAAATAGAAGAGGAAGAGAATCATCCACCCGCCCATGCTTTAACCACAGAAAAAGCAGCTTCGTGCGATGAGGGAGCAACCTCAGTAGTTGAAATGAACGAGTATACAAAGGTGAAAAAGCTGAGGACGACCTGTTGCACTAATTTTCAGTGCTGCGGCAGCCGCCCAGCTTTCCCCATTTCTCCTAGTACCTTACTTTCGGGCTCAGCATTTGCCTTTTCTGCCATGGTTGTCGTCTTCCATTTTCTCAAGAGGAAAACATAA

Network for GWHGAAEX017730

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX017730
MELELGRTGDLSGAFASTETEAYFIVGAHLPGFTKDEIHVVMNEEEKLISVRGEGHIASQESLMANRVAITRKVSVESFDRKFAVPQNVNWSGIDAWFDEGRSILFISILKLLEAHEKDSENAVRQQQDQVTQEFSNLTGEKATTKELPEHKEPRPLKDGKPPLETPRGVIETKHSARSQVTTEEIQTNEQEVKERKEKPAAVQMHEESKAAELPDKELNEQWLHEFKKDEDGQQNDPDIKVSKTSQTIEHKELSLEPQSEKTNKPPIKPPKEEKEVKPESEQPERHEEQEQKTRTALSREEAKNLKSQRPNEPGQKHDVETQEHNKLTVASTYEESESVGLKEENQESALRAPKENKKHLRMIASMKTTKIRKSQPLHQEQTKNTQNNVNHSVKELTKQEELEKDEQEEEEDGAKRQLHQQEGNEPLVRSKSAIHPPYKKDNTTQSAKPNDADKQQSPKVSETVQVLIAAPIQSGEPREQSQQQQEAEELEGRTVVPTCQMPGATAPDQVLEDEHCQSERLQKEFQQHEQELQKPQRMGFEKVAFPTKKTFRQEKESQLQLDQGIMKLTVEKSAGEEQNRLQEAAEPTQLKDKTPISTPGQVLEAPQHIQSDLHDKLKHNKQDAPVDKEPTVAPASEMPNAANLQQNEEQKAHAHENHESEEHRWENSNRDASKTRVLQDLKIYEDFKQGDEENKQNDEKPIVKLHNDPMEVGKPKILEGEKEAIAGVKQEIEQETTECNKPIIQPHNKEVAAIIFTKLTKREKIQSEDTKQDLFKATDSMLEGAPQIRSEDMKQKLEQHQEEVQENGRLISTYEKPKDAGLMDKEELKQMFHQLNEDGNAKKVKHKLNQPEQENLECRKPTQSPSEKYNATQLAESKETDHRQRLDVRRLIKEPEAAQVQSKNHDQLQHQEQEVQEHIKSKVVPTFEKSQPIPSDQPTEEHFEKKIQQHEHEIKKQEKSNTLVPTCEKDNQGKEEPKLELKEFQEDKKPQGIGPDIDTFLTKKLLNLEEESSLLLQENKVLKQEPEKPIRKAYSALQEAGEQTRPENAENDGENEEAQVKKSVGKSTYKNKIEREFQDTAEEGHDIESIVKLQEKIKQAKQLPKPMVEQIESNEHHEPATGTPFKIPHMVAFKAPKILELDTPKAPITEGVPQMQEIYPFKESKQFEMPPFGSPSKALDIKEHRPPPLEQEHGIENKAKSPKSHQRKKKTELQREMKSIDLNYKEEIEKERQPKTDESFKHEIIMNSPVKKPNKEIQKPKFEKEMDESMILKQKILQTEEGETSKSQGFTTMKKTESKSVLQAQESDYDQELIYKKPAEVSSFHVSEVANLIRPEKEQESGEKDALSYKRIEPGNTRGKEQLREQIRKPTNPEEETPPLEPDAKKVKIPITGMLKIIWAPEPEDSNKKPEKSLQFKPPKKVEAQVKVYLIVEAEQPDTPAVEKTKRESQTTELEKSTTRKQPLKGKQLKEIAPPEIQQYMEENKKEQSILELAEQLKLLKKEAHKIVSAADQELARHGVVLEPQDKAERKEHFVETVPEQKSYQLNEGKHDIESPKLQIPPLFPIELEDKIVPERYKIAVERHKLQPRTQGTTKLGSSLPLSPENDVIEHERPSMIQTELQPNSDRQKHNEQNTAGCQTPEYEESTALQEGQTNEKLAPRKAHEENDCPVENAPRKVSDVSQQLKICELEHQQYLLKEIEEEENHPPAHALTTEKAASCDEGATSVVEMNEYTKVKKLRTTCCTNFQCCGSRPAFPISPSTLLSGSAFAFSAMVVVFHFLKRKT

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.520
SRP064423	SRR2545915	Juvenile tuber	2.070
SRP108465	SRR5643513	five period of Gastrodia elata	1.050
	SRR5643514	five period of Gastrodia elata	0.950
	SRR5643515	five period of Gastrodia elata	0.890
	SRR5643524	five period of Gastrodia elata	0.810
	SRR5643525	five period of Gastrodia elata	1.740
	SRR5643528	five period of Gastrodia elata	1.140
	SRR5643658	five period of Gastrodia elata	0.890
	SRR5643659	five period of Gastrodia elata	0.280
	SRR5643660	five period of Gastrodia elata	0.130
	SRR5643661	five period of Gastrodia elata	0.320
	SRR5643662	five period of Gastrodia elata	0.160
	SRR5643663	five period of Gastrodia elata	0.200
	SRR5643664	five period of Gastrodia elata	0.380
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.520
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.430
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.630
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.630
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.800
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.710
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.710
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	1.400
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	1.090
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.860
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.740
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.740
SRP279888	Gastro	Gastrodia elata tuber	0.55
	Juven	Juvenile tuber	0.41
	Mother_Gastro	Mother tuber of Gastrodia elata	2.23
	Mother_Juven	Mother tuber of Juvenile	1.35