Detail information of GWHGAAEX017734/evm.TU.scaffold_86.63


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG29220Uncharacterized conserved protein
nrgi|672133234|ref|XP_008790226.1|0PREDICTED: magnesium transporter NIPA2-like isoform X2 [Phoenix dactylifera]
Swissprottr|Q94AH3|NIPA4_ARATH0Probable magnesium transporter NIPA4
trEMBLtr|A0A067LI84|A0A067LI84_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP47108.1}
TAIRAT1G344700Protein of unknown function (DUF803)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008131886293225930+
Transcript Sequence

Network for GWHGAAEX017734

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05653.13Mg_trans_NIPA283193.00E-133
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0015693Biological Processmagnesium ion transport
GO:0015095Molecular Functionmagnesium ion transmembrane transporter activity
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms30.240
SRR2545915Juvenile tuber30.200
SRP108465SRR5643513five period of Gastrodia elata32.800
SRR5643514five period of Gastrodia elata30.640
SRR5643515five period of Gastrodia elata33.250
SRR5643524five period of Gastrodia elata34.600
SRR5643525five period of Gastrodia elata78.580
SRR5643528five period of Gastrodia elata61.190
SRR5643658five period of Gastrodia elata82.820
SRR5643659five period of Gastrodia elata39.720
SRR5643660five period of Gastrodia elata33.220
SRR5643661five period of Gastrodia elata34.390
SRR5643662five period of Gastrodia elata38.480
SRR5643663five period of Gastrodia elata37.690
SRR5643664five period of Gastrodia elata34.820
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_130.550
SRR6049655Rhizomagastrodiae_C368-T10_good_125.380
SRR6049656Rhizomagastrodiae_C368-T07_good_130.800
SRR6049657Rhizomagastrodiae_C368-T07_good_132.340
SRR6049658Rhizomagastrodiae_C368-T04_good_127.600
SRR6049659Rhizomagastrodiae_C368-T04_good_133.070
SRR6049660Rhizomagastrodiae_C368-T01_good_128.870
SRR6049661Rhizomagastrodiae_C368-T04_good_128.220
SRR6049662Rhizomagastrodiae_C368-T01_good_130.480
SRR6049663Rhizomagastrodiae_C368-T01_good_128.570
SRR6049664Rhizomagastrodiae_C368-T10_good_133.880
SRR6049665Rhizomagastrodiae_C368-T10_good_133.880
SRP279888GastroGastrodia elata tuber 31.23
JuvenJuvenile tuber41.89
Mother_GastroMother tuber of Gastrodia elata 47.22
Mother_JuvenMother tuber of Juvenile 55.78