Detail information of GWHGAAEX017737/evm.TU.scaffold_86.68


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG10181.00E-52Cytosine deaminase FCY1 and related enzymes
nrgi|573963504|ref|XP_006663889.1|3.61E-65PREDICTED: uncharacterized protein LOC102700666 isoform X1 [Oryza brachyantha]
trEMBLtr|J3NBX2|J3NBX2_ORYBR1.00E-65Uncharacterized protein {ECO:0000313|EnsemblPlants:OB12G14800.1}
TAIRAT1G481701.00E-52Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008134724263480384-
Transcript Sequence

Network for GWHGAAEX017737

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16093.4PAC4501222.10E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0043248Biological Processproteasome assembly

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.040
SRR2545915Juvenile tuber27.360
SRP108465SRR5643513five period of Gastrodia elata18.820
SRR5643514five period of Gastrodia elata24.670
SRR5643515five period of Gastrodia elata24.070
SRR5643524five period of Gastrodia elata26.070
SRR5643525five period of Gastrodia elata17.400
SRR5643528five period of Gastrodia elata18.100
SRR5643658five period of Gastrodia elata14.940
SRR5643659five period of Gastrodia elata20.040
SRR5643660five period of Gastrodia elata19.450
SRR5643661five period of Gastrodia elata19.700
SRR5643662five period of Gastrodia elata19.130
SRR5643663five period of Gastrodia elata17.800
SRR5643664five period of Gastrodia elata20.070
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.160
SRR6049655Rhizomagastrodiae_C368-T10_good_133.090
SRR6049656Rhizomagastrodiae_C368-T07_good_128.050
SRR6049657Rhizomagastrodiae_C368-T07_good_122.100
SRR6049658Rhizomagastrodiae_C368-T04_good_128.230
SRR6049659Rhizomagastrodiae_C368-T04_good_131.760
SRR6049660Rhizomagastrodiae_C368-T01_good_126.980
SRR6049661Rhizomagastrodiae_C368-T04_good_129.600
SRR6049662Rhizomagastrodiae_C368-T01_good_137.790
SRR6049663Rhizomagastrodiae_C368-T01_good_133.450
SRR6049664Rhizomagastrodiae_C368-T10_good_128.720
SRR6049665Rhizomagastrodiae_C368-T10_good_128.720
SRP279888GastroGastrodia elata tuber 20.05
JuvenJuvenile tuber16.54
Mother_GastroMother tuber of Gastrodia elata 18.87
Mother_JuvenMother tuber of Juvenile 23.36