Detail information of GWHGAAEX017742/evm.TU.scaffold_86.75


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG27965.00E-128Uncharacterized conserved protein
nrgi|743817052|ref|XP_010930814.1|9.49E-150PREDICTED: trafficking protein particle complex subunit 12 [Elaeis guineensis]
trEMBLtr|A5B198|A5B198_VITVI2.00E-134Putative uncharacterized protein {ECO:0000313|EMBL:CAN78542.1}
TAIRAT4G398205.00E-128Tetratricopeptide repeat (TPR)-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008139042103905564-
Transcript Sequence

Network for GWHGAAEX017742

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13431.5TPR_172622844.90E-05
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.420
SRR2545915Juvenile tuber9.890
SRP108465SRR5643513five period of Gastrodia elata23.620
SRR5643514five period of Gastrodia elata19.320
SRR5643515five period of Gastrodia elata17.630
SRR5643524five period of Gastrodia elata19.820
SRR5643525five period of Gastrodia elata19.650
SRR5643528five period of Gastrodia elata20.540
SRR5643658five period of Gastrodia elata23.310
SRR5643659five period of Gastrodia elata17.790
SRR5643660five period of Gastrodia elata22.520
SRR5643661five period of Gastrodia elata18.610
SRR5643662five period of Gastrodia elata21.530
SRR5643663five period of Gastrodia elata20.270
SRR5643664five period of Gastrodia elata18.140
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.950
SRR6049655Rhizomagastrodiae_C368-T10_good_124.860
SRR6049656Rhizomagastrodiae_C368-T07_good_122.010
SRR6049657Rhizomagastrodiae_C368-T07_good_120.840
SRR6049658Rhizomagastrodiae_C368-T04_good_116.730
SRR6049659Rhizomagastrodiae_C368-T04_good_113.770
SRR6049660Rhizomagastrodiae_C368-T01_good_117.350
SRR6049661Rhizomagastrodiae_C368-T04_good_114.300
SRR6049662Rhizomagastrodiae_C368-T01_good_120.010
SRR6049663Rhizomagastrodiae_C368-T01_good_118.070
SRR6049664Rhizomagastrodiae_C368-T10_good_123.310
SRR6049665Rhizomagastrodiae_C368-T10_good_123.310
SRP279888GastroGastrodia elata tuber 17.99
JuvenJuvenile tuber27.67
Mother_GastroMother tuber of Gastrodia elata 19.40
Mother_JuvenMother tuber of Juvenile 19.21