Detail information of GWHGAAEX017747/evm.TU.scaffold_86.82


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG44831.00E-12Uncharacterized conserved protein
nrgi|672159895|ref|XP_008799714.1|1.25E-79PREDICTED: coiled-coil domain-containing protein R3HCC1L [Phoenix dactylifera]
trEMBLtr|M0RIK4|M0RIK4_MUSAM1.00E-67Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P15790_001}
TAIRHS220515691.00E-12Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008141408034164079-
Transcript Sequence

Network for GWHGAAEX017747

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms94.550
SRR2545915Juvenile tuber82.340
SRP108465SRR5643513five period of Gastrodia elata79.270
SRR5643514five period of Gastrodia elata71.660
SRR5643515five period of Gastrodia elata66.250
SRR5643524five period of Gastrodia elata68.450
SRR5643525five period of Gastrodia elata102.180
SRR5643528five period of Gastrodia elata88.290
SRR5643658five period of Gastrodia elata134.700
SRR5643659five period of Gastrodia elata96.020
SRR5643660five period of Gastrodia elata116.830
SRR5643661five period of Gastrodia elata102.070
SRR5643662five period of Gastrodia elata123.170
SRR5643663five period of Gastrodia elata138.190
SRR5643664five period of Gastrodia elata163.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1100.390
SRR6049655Rhizomagastrodiae_C368-T10_good_196.090
SRR6049656Rhizomagastrodiae_C368-T07_good_180.430
SRR6049657Rhizomagastrodiae_C368-T07_good_1117.250
SRR6049658Rhizomagastrodiae_C368-T04_good_171.010
SRR6049659Rhizomagastrodiae_C368-T04_good_176.140
SRR6049660Rhizomagastrodiae_C368-T01_good_173.300
SRR6049661Rhizomagastrodiae_C368-T04_good_167.960
SRR6049662Rhizomagastrodiae_C368-T01_good_164.040
SRR6049663Rhizomagastrodiae_C368-T01_good_154.890
SRR6049664Rhizomagastrodiae_C368-T10_good_170.910
SRR6049665Rhizomagastrodiae_C368-T10_good_170.910
SRP279888GastroGastrodia elata tuber 112.85
JuvenJuvenile tuber106.37
Mother_GastroMother tuber of Gastrodia elata 64.85
Mother_JuvenMother tuber of Juvenile 71.10