Gene detail

Detail information of GWHGAAEX017755/evm.TU.scaffold_87.8

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|672182362\|ref\|XP_008811426.1\|	PREDICTED: LOW QUALITY PROTEIN: filament-like plant protein 4 [Phoenix dactylifera]
Swissprot	tr\|Q0WSY2\|FPP4_ARATH	Filament-like plant protein 4
trEMBL	tr\|M0RWF7\|M0RWF7_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr1P02490_001}
TAIR	AT1G19835	Plant protein of unknown function (DUF869)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000088	385719	391770	+

Transcript Sequence
>GWHTAAEX017755 CCTCGATATTTTAAGCGGCACCAACAGCCTCTATTTTATCTTCTCTGCTGCCAAACTGATGATGCGTCGGTGAAGAGGTGAAAGTATTGCCCTTGGAACTCCAAAGGCCCCACTCTCAACGTTGCAGCAATAAAAGAACCTCTTTTTTCTTTTCCTTCCTCCCTTTCTGGTGTCCCAGGTGGAGCATTCCAGCTAGGGCATTTTGGAGAGCCCATGCTCTGAAATCGCATTCTTGGATTTTGTTCTTTCCTGCTTGCATTTCTTCAGGAATAGGGTAATATTCTTAGAATGGAAAGACGAAGCTGGCCATGGAAGAGGAAATCATCTGAGAAGGCAAGTACTGACTCTGATTCTATCAGGGCTTCTCTGTCTAGCATAGGAGCCAAGCAAGGAGATCAGGAGCTTGCAAAGCCTGTGAGTTTTGTACAAATTTCCGTAGAGAAGTATGAGCATTATGATCGGCTAGAAGAGCAGGTGTTGATTCTGAACGAAAATTTGACTGATATGAAGAAAAGGCTATCCTCGGCTCAGGCTGATATGATCACTAAAGATGATATGGTTAAACAGCATGCTAAAGTTGCTGAAGAAGCTATTTCAGGTTGGGAAAAGACTGAAGCTGAAAATTTGGCTTTAAAACATCAGCTTGAATCTGCTACCCTTCTTAAGCTAGCTTCGGAAGAGAGAGCAGTTCATCTTGATAACGCTCTTAAGGAGTGCATGAAGCAGATTCACAATGTGAAGGAAGAAGCTGAGAGAAAGCTACATGATGTTGTCTTCGCTAAGACCAAACTATGGGAGAAAGTTAAGTGTGAGCTTGAAGCCACCATTGCTGGACTTGAGCAAGAATTTTTAAAGAATTCTGCTGAAACAGCTGCACTTTCGAGGTCTCTACAAGATCGATCAATATTGCTGGTGAAAATCAGCGAGGAAAAAGCGCAAGCTGATGCTGAGATTGAGGTTCTGAAAACCAATATTCAATCATATGTGAGGGAGATAAATTCTCTGAAATATGAACTTAATATTGCCGCCCAGGAGCTGGAGATTCGTAATGAGGAGAAGAACATGAGTGTTAAAGCTGCTGAAGTAGCAAACAAGCAGCAGTCTGATGGTGTAAAAAAGATAGCCAATTTGGAAGCTGAGTGCCAAAGGTTGCGTGGCCTTGTGAGAAAACGGTTGCCTGGACCTGCTGCTTTAGCTCAAATGAAACTTGAGACGGAGACCTTAGGCAATGGTTTTGGAGAAACCAGGGCAAGGAGACAATCTGTTAAGAGCTCAGGCTCCTATCCATTCTTGTCTAGAGAAGCCAATGCTAATGAAGTTGAGCACTGTCTCAAAGAGAATGAGTTTCTTACTTCTCGTTTATTAGCAATGGAGGAAGAAACAAAGATGCTGAAGGAGGCACTGTCAAAAAGAAATAGCGAGCTACAGCATTCGGCAAGCACATGCGCCAAAACAGCTAACAAACTTCACGTTCTTGAAGGGCAGATTCTCGTTATGAATAAACAGAAGAAATCTTTGAAATCAAATGCTGACTTCTCATTCGAGGGATCCATGAGTCAAAATGAAAGCAGCCGCAGCTTAGCTTTGATGTCTGATGATGGAGTTGACGATGGAGGAAGCAATGCGGGGTCTTGGACCTCGGCATTGGTTTCGGACCTGTCACAGTACAAGAAAGAAAAAAATTCTATAAGAAGTAAGACCGCTCAAAGCCCAAATCAAATAGAACTTATGGATGACTTTTTGGAGATGGAGCGATTGGCAGGCTTATCATCAGAGAACAATGTACTTGCCACTGTTTCAGTTGAAGGGGTCGAGAAGATGGACGCAAATTGCGATGACACTTCTTCAGTCGATGTTTATATGGATGTATGCAAGGAGCAAGCATCTAGTTTGAAAGAGAATCCAAATTTCAATCTGGTGACTGAGGATCATCAGCCTTCAGGAAAATCATTTTCAATGCTTCAGGCACGAATTGCTTCTGCAGTTGAATCTAAGGCTATTGAATCTGAAGCTAGAAATCTAGTAGAGGAAATTATGACAATAATACAAGATGCACAGAATGAATTGTTTATTCAGTCCAAAAACCTTCTTAATGTGGTGGCTCCGGAGAGCATAGATGCCAAATCATGCCAGGAAATAGAAAATTCAATGAAGCAAGACTTGAGAAGTGCCATTTCTTGGATCCAAGATTTTGTTCTATTACTCTACAAGGATGCTGCTCCTGGAAAAGCATCTGAGCTTCAAGTAACAAAAGAAGAACTTGAGGAGTTTTCAGATTCTGTCAAAAAAGTTTTCTCAAATAATTTAAACTCAGATGACTTTATCCTTTCATTGTGCCATGTGTTATCTGAAATTAAAGAACTTAGATCGAGAGCATGTGTTTCACCCCAAGTACTAGAGCATGAAGAAGCTCATCCTGATTCAACGGAAGGGAAAGTATCTGCAGATTATGATCTTTCCCTTTTAGCATCTGAGATAGAAGTTGTTAAGAAACTTAACAAACCAACAACTGAATCAGAGGCTGCTGCACCACAAAGCTTCTCATTTGAGGAATTCAAAATTCTAAAGATAGAGAAGGACAGCATGGAGGCGGATCTTTTAAATTGCAAGGAAAATTTGAAGCATGCCCAACTTCAGCTGACTGAAACCGGGCATAACTTAACCGAGCTCAAACAGCTGCTTTCTGTTTGCCAGAATTCAAATGATTTGGCCGGGACTCAACTGAGGTGCATGACTGAGTCATATAAGTTACTGGAAACACGTGGTACAGAACTAGAAGCTGAAATAAACCTTCTAAGGTCAAAAGTAGAAGTGTTGGAATGCGAGCTCAGTGCGGAAAGGCATAGTCATCAGGATTATCTAGCCAAATATGATAGCCTGCAGGAGCAAATGAGGATCATGAGTTTATCCAAGTGCTCATGTTTTTCAGAAGCTGATGAGGACTCAAAGGCAAGACAGGAGAGGGAGATTGCTGCAGCTGCAGATAAACTAACAGCATGCCAGGAGGCCATATACCTTCTAAACAAGCAAATAAATGCTTTGCAAGCTCCTGTAGAGGAAAAGAGCAAGAGCTGCCGTTTCTCGGAAGAGCACAGCCCGGAAAGTGATATGGTTTCAAGGTCTACAAGTGAAGCAGTTAACGTGTCACCGCCATCTCATTACAGCATATCTGATGTGGAATCGAGCCCTGCTGCGAAACTGACGGCCAGTACAAAGCACAGATCTAGATCAACATCAGCTTCTTCCCTCTTGGGCATGCTGAACGATAGGCCGGCCGGGCATGGCTTTAGCCGGTTTTTTGCGAAAGAAAAGAATGAAATTTAAAAATCGACTATGGTGGCCGTTTCTCCTATTTATGAGGTGATTTAATCCCTGTTTCCTCAGAAATCATTGAAATTCCCAATATTTAGTTTAGTGATTGAGGGAAGTTTTAGTGGTTTGTGCTTATGGTGAATGGTCAAATGTAGTCGGTCTAGGATTTTGAAGCTAGATTTTCATTGGCATCCTTAGGAGATGTGGGTTTTTTTGTTTTCACATTGGCTTCAGGTTAGGTGGATAAAGATAAAATGTGTGGTACTTTAGTTGTGGGTGTACAGTGTGATTGAAGCCATTACTTAGTTGTTGATTGTTCTTGTATAGTTTTGAGCGAATTATATACATAACACTCGTATCTCTATAATTTATCTATTCAGTACATCTTATTTTATATTTACAGAAGTTTTTAGTTATAATTTTGTTAAAAATGTTTGACAAGAAAGTGTGCAGAAAATCATTCGCACTAAATGCATTGCTTATATAGAAGAAAGGTGAGTACAATAATGTTGATTTGAAAACCATTTGGTGAGGCAAACGCCAAGGCGTGCCCCAGCGCTTGGCGCTCGAAAAGCAGGCGCCATAGTGTGCCCTAGTGCATGTCGATTGCAAGTTAAGCATCACGGTGTGCCATGCGTCTACGGTTTTACATGACTCATTTTGAGGGATTTATAAAACTATAAATAGCTGGCTAAGGGTGTGTTCTTGTCATTTTTCTCAGTTCTCATCTTAAATTTGAAAGAGGGTTAGAGTTTTTTGAAGCATGTGAAAGGAGAAGAATGTTAGAATCTAGTTGTTGTCTTT

Network for GWHGAAEX017755

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05911.10	FPP	87	924	2.90E-243

Protein Sequence

>GWHPAAEX017755
MERRSWPWKRKSSEKASTDSDSIRASLSSIGAKQGDQELAKPVSFVQISVEKYEHYDRLEEQVLILNENLTDMKKRLSSAQADMITKDDMVKQHAKVAEEAISGWEKTEAENLALKHQLESATLLKLASEERAVHLDNALKECMKQIHNVKEEAERKLHDVVFAKTKLWEKVKCELEATIAGLEQEFLKNSAETAALSRSLQDRSILLVKISEEKAQADAEIEVLKTNIQSYVREINSLKYELNIAAQELEIRNEEKNMSVKAAEVANKQQSDGVKKIANLEAECQRLRGLVRKRLPGPAALAQMKLETETLGNGFGETRARRQSVKSSGSYPFLSREANANEVEHCLKENEFLTSRLLAMEEETKMLKEALSKRNSELQHSASTCAKTANKLHVLEGQILVMNKQKKSLKSNADFSFEGSMSQNESSRSLALMSDDGVDDGGSNAGSWTSALVSDLSQYKKEKNSIRSKTAQSPNQIELMDDFLEMERLAGLSSENNVLATVSVEGVEKMDANCDDTSSVDVYMDVCKEQASSLKENPNFNLVTEDHQPSGKSFSMLQARIASAVESKAIESEARNLVEEIMTIIQDAQNELFIQSKNLLNVVAPESIDAKSCQEIENSMKQDLRSAISWIQDFVLLLYKDAAPGKASELQVTKEELEEFSDSVKKVFSNNLNSDDFILSLCHVLSEIKELRSRACVSPQVLEHEEAHPDSTEGKVSADYDLSLLASEIEVVKKLNKPTTESEAAAPQSFSFEEFKILKIEKDSMEADLLNCKENLKHAQLQLTETGHNLTELKQLLSVCQNSNDLAGTQLRCMTESYKLLETRGTELEAEINLLRSKVEVLECELSAERHSHQDYLAKYDSLQEQMRIMSLSKCSCFSEADEDSKARQEREIAAAADKLTACQEAIYLLNKQINALQAPVEEKSKSCRFSEEHSPESDMVSRSTSEAVNVSPPSHYSISDVESSPAAKLTASTKHRSRSTSASSLLGMLNDRPAGHGFSRFFAKEKNEI

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	35.880
SRP064423	SRR2545915	Juvenile tuber	95.580
SRP108465	SRR5643513	five period of Gastrodia elata	23.570
	SRR5643514	five period of Gastrodia elata	24.850
	SRR5643515	five period of Gastrodia elata	19.150
	SRR5643524	five period of Gastrodia elata	20.770
	SRR5643525	five period of Gastrodia elata	34.230
	SRR5643528	five period of Gastrodia elata	25.140
	SRR5643658	five period of Gastrodia elata	50.370
	SRR5643659	five period of Gastrodia elata	33.190
	SRR5643660	five period of Gastrodia elata	42.540
	SRR5643661	five period of Gastrodia elata	42.230
	SRR5643662	five period of Gastrodia elata	27.800
	SRR5643663	five period of Gastrodia elata	33.230
	SRR5643664	five period of Gastrodia elata	29.230
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	19.070
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	17.440
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	23.480
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	25.250
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	15.340
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	13.410
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	17.110
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	20.200
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	16.020
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	10.930
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	15.440
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	15.440
SRP279888	Gastro	Gastrodia elata tuber	29.35
	Juven	Juvenile tuber	38.46
	Mother_Gastro	Mother tuber of Gastrodia elata	9.18
	Mother_Juven	Mother tuber of Juvenile	15.90