Detail information of GWHGAAEX017771/evm.TU.scaffold_87.37


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|404497312|ref|YP_006721418.1|9.00E-21membrane protein [Geobacter metallireducens GS-15]
KOGKOG31404.00E-128Predicted membrane protein
nrgi|672125834|ref|XP_008786345.1|7.79E-141PREDICTED: uncharacterized membrane protein At4g09580-like [Phoenix dactylifera]
Swissprottr|Q8L586|Y4958_ARATH2.00E-105Uncharacterized membrane protein At4g09580
trEMBLtr|A0A061G6G3|A0A061G6G3_THECC5.00E-135SNARE associated Golgi protein family {ECO:0000313|EMBL:EOY25136.1}
TAIRAT4G177904.00E-128SNARE associated Golgi protein family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008815440691551767+
Transcript Sequence

Network for GWHGAAEX017771

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09335.10SNARE_assoc872064.80E-19
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms32.330
SRR2545915Juvenile tuber33.730
SRP108465SRR5643513five period of Gastrodia elata40.130
SRR5643514five period of Gastrodia elata45.010
SRR5643515five period of Gastrodia elata44.130
SRR5643524five period of Gastrodia elata43.110
SRR5643525five period of Gastrodia elata84.100
SRR5643528five period of Gastrodia elata88.900
SRR5643658five period of Gastrodia elata96.650
SRR5643659five period of Gastrodia elata28.080
SRR5643660five period of Gastrodia elata24.180
SRR5643661five period of Gastrodia elata29.220
SRR5643662five period of Gastrodia elata27.260
SRR5643663five period of Gastrodia elata25.730
SRR5643664five period of Gastrodia elata29.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_132.110
SRR6049655Rhizomagastrodiae_C368-T10_good_142.520
SRR6049656Rhizomagastrodiae_C368-T07_good_138.250
SRR6049657Rhizomagastrodiae_C368-T07_good_133.260
SRR6049658Rhizomagastrodiae_C368-T04_good_132.330
SRR6049659Rhizomagastrodiae_C368-T04_good_132.330
SRR6049660Rhizomagastrodiae_C368-T01_good_139.740
SRR6049661Rhizomagastrodiae_C368-T04_good_139.350
SRR6049662Rhizomagastrodiae_C368-T01_good_129.410
SRR6049663Rhizomagastrodiae_C368-T01_good_131.700
SRR6049664Rhizomagastrodiae_C368-T10_good_128.560
SRR6049665Rhizomagastrodiae_C368-T10_good_128.560
SRP279888GastroGastrodia elata tuber 23.11
JuvenJuvenile tuber45.85
Mother_GastroMother tuber of Gastrodia elata 106.07
Mother_JuvenMother tuber of Juvenile 71.11