Detail information of GWHGAAEX017774/evm.TU.scaffold_87.41


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|291303164|ref|YP_003514442.1|7.00E-11NAD-dependent epimerase/dehydratase [Stackebrandtia nassauensis DSM 44728]
KOGKOG15024.00E-80Flavonol reductase/cinnamoyl-CoA reductase
nrgi|672125826|ref|XP_008786341.1|5.65E-128PREDICTED: cinnamoyl-CoA reductase 2-like [Phoenix dactylifera]
Swissprottr|Q9SAH9|CCR2_ARATH2.00E-31Cinnamoyl-CoA reductase 2
trEMBLtr|M0SSZ8|M0SSZ8_MUSAM4.00E-124Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P28860_001}
TAIRAT2G239104.00E-80NAD(P)-binding Rossmann-fold superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008816913631694179+
Transcript Sequence

Network for GWHGAAEX017774

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13460.5NAD_binding_10231311.50E-07
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms51.560
SRR2545915Juvenile tuber62.710
SRP108465SRR5643513five period of Gastrodia elata87.400
SRR5643514five period of Gastrodia elata63.330
SRR5643515five period of Gastrodia elata212.780
SRR5643524five period of Gastrodia elata106.420
SRR5643525five period of Gastrodia elata236.380
SRR5643528five period of Gastrodia elata783.110
SRR5643658five period of Gastrodia elata179.410
SRR5643659five period of Gastrodia elata177.130
SRR5643660five period of Gastrodia elata121.980
SRR5643661five period of Gastrodia elata195.040
SRR5643662five period of Gastrodia elata180.170
SRR5643663five period of Gastrodia elata120.680
SRR5643664five period of Gastrodia elata270.460
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1124.680
SRR6049655Rhizomagastrodiae_C368-T10_good_151.770
SRR6049656Rhizomagastrodiae_C368-T07_good_190.160
SRR6049657Rhizomagastrodiae_C368-T07_good_187.640
SRR6049658Rhizomagastrodiae_C368-T04_good_176.360
SRR6049659Rhizomagastrodiae_C368-T04_good_175.260
SRR6049660Rhizomagastrodiae_C368-T01_good_1128.120
SRR6049661Rhizomagastrodiae_C368-T04_good_193.740
SRR6049662Rhizomagastrodiae_C368-T01_good_188.080
SRR6049663Rhizomagastrodiae_C368-T01_good_1133.460
SRR6049664Rhizomagastrodiae_C368-T10_good_178.720
SRR6049665Rhizomagastrodiae_C368-T10_good_178.720
SRP279888GastroGastrodia elata tuber 83.85
JuvenJuvenile tuber57.04
Mother_GastroMother tuber of Gastrodia elata 1,296.75
Mother_JuvenMother tuber of Juvenile 1,277.38