Detail information of GWHGAAEX017777/evm.TU.scaffold_87.44


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|478177097|ref|YP_007698170.1|2.00E-06[protein-PII] uridylyltransferase GlnD [Octadecabacter arcticus 238]
nrgi|694996250|ref|XP_009393011.1|2.75E-162PREDICTED: uncharacterized protein LOC103978802 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9LNA5|ACR8_ARATH7.00E-139ACT domain-containing protein ACR8 {ECO:0000305}
trEMBLtr|M0RY36|M0RY36_MUSAM1.00E-162Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P08280_001}
TAIRAT1G124203.00E-138ACT domain repeat 8

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008817862891788531-
Transcript Sequence

Network for GWHGAAEX017777

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01842.24ACT1191552.90E-08
PF01842.24ACT2433018.40E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.860
SRR2545915Juvenile tuber24.710
SRP108465SRR5643513five period of Gastrodia elata29.130
SRR5643514five period of Gastrodia elata30.590
SRR5643515five period of Gastrodia elata38.800
SRR5643524five period of Gastrodia elata31.550
SRR5643525five period of Gastrodia elata96.070
SRR5643528five period of Gastrodia elata132.570
SRR5643658five period of Gastrodia elata75.540
SRR5643659five period of Gastrodia elata99.640
SRR5643660five period of Gastrodia elata64.740
SRR5643661five period of Gastrodia elata83.870
SRR5643662five period of Gastrodia elata49.420
SRR5643663five period of Gastrodia elata40.310
SRR5643664five period of Gastrodia elata71.360
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_156.760
SRR6049655Rhizomagastrodiae_C368-T10_good_139.670
SRR6049656Rhizomagastrodiae_C368-T07_good_147.230
SRR6049657Rhizomagastrodiae_C368-T07_good_154.130
SRR6049658Rhizomagastrodiae_C368-T04_good_167.520
SRR6049659Rhizomagastrodiae_C368-T04_good_169.040
SRR6049660Rhizomagastrodiae_C368-T01_good_145.020
SRR6049661Rhizomagastrodiae_C368-T04_good_154.820
SRR6049662Rhizomagastrodiae_C368-T01_good_131.830
SRR6049663Rhizomagastrodiae_C368-T01_good_146.420
SRR6049664Rhizomagastrodiae_C368-T10_good_167.780
SRR6049665Rhizomagastrodiae_C368-T10_good_167.780
SRP279888GastroGastrodia elata tuber 27.27
JuvenJuvenile tuber17.84
Mother_GastroMother tuber of Gastrodia elata 245.35
Mother_JuvenMother tuber of Juvenile 106.06