Detail information of GWHGAAEX017779/evm.TU.scaffold_87.47


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|17228223|ref|NP_484771.1|3.00E-54hypothetical protein alr0728 [Nostoc sp. PCC 7120]
KOGKOG29141.00E-78Predicted haloacid-halidohydrolase and related hydrolases
nrgi|695001251|ref|XP_009415347.1|6.27E-120PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein Sgpp [Musa acuminata subsp. malaccensis]
Swissprottr|Q9ZVJ5|SGGP_ARATH3.00E-100Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
trEMBLtr|M0S2L0|M0S2L0_MUSAM2.00E-120Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P24030_001}
TAIRAT2G387401.00E-78Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008820297022037380-
Transcript Sequence

Network for GWHGAAEX017779

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13419.5HAD_2262092.80E-30
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016787Molecular Functionhydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms88.440
SRR2545915Juvenile tuber50.300
SRP108465SRR5643513five period of Gastrodia elata77.930
SRR5643514five period of Gastrodia elata109.120
SRR5643515five period of Gastrodia elata98.760
SRR5643524five period of Gastrodia elata103.490
SRR5643525five period of Gastrodia elata117.700
SRR5643528five period of Gastrodia elata93.190
SRR5643658five period of Gastrodia elata104.830
SRR5643659five period of Gastrodia elata160.760
SRR5643660five period of Gastrodia elata134.600
SRR5643661five period of Gastrodia elata135.740
SRR5643662five period of Gastrodia elata127.100
SRR5643663five period of Gastrodia elata194.070
SRR5643664five period of Gastrodia elata137.210
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_185.360
SRR6049655Rhizomagastrodiae_C368-T10_good_196.040
SRR6049656Rhizomagastrodiae_C368-T07_good_190.760
SRR6049657Rhizomagastrodiae_C368-T07_good_174.820
SRR6049658Rhizomagastrodiae_C368-T04_good_190.320
SRR6049659Rhizomagastrodiae_C368-T04_good_196.780
SRR6049660Rhizomagastrodiae_C368-T01_good_1101.800
SRR6049661Rhizomagastrodiae_C368-T04_good_190.230
SRR6049662Rhizomagastrodiae_C368-T01_good_1104.440
SRR6049663Rhizomagastrodiae_C368-T01_good_1123.450
SRR6049664Rhizomagastrodiae_C368-T10_good_198.130
SRR6049665Rhizomagastrodiae_C368-T10_good_198.130
SRP279888GastroGastrodia elata tuber 119.20
JuvenJuvenile tuber79.39
Mother_GastroMother tuber of Gastrodia elata 48.18
Mother_JuvenMother tuber of Juvenile 44.81