Detail information of GWHGAAEX017781/evm.TU.scaffold_87.49


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG18052.00E-159DNA replication helicase
nrgi|672125882|ref|XP_008786372.1|0PREDICTED: DNA replication ATP-dependent helicase/nuclease DNA2 [Phoenix dactylifera]
trEMBLtr|M0SXY4|M0SXY4_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P12550_001}
TAIRAT1G088402.00E-159DNA replication helicase, putative

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008821653222212327-
Transcript Sequence

Network for GWHGAAEX017781

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08696.10Dna23235231.80E-55
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K10742DNA2 DNA replication map03030

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.570
SRR2545915Juvenile tuber24.050
SRP108465SRR5643513five period of Gastrodia elata17.300
SRR5643514five period of Gastrodia elata17.850
SRR5643515five period of Gastrodia elata17.120
SRR5643524five period of Gastrodia elata16.400
SRR5643525five period of Gastrodia elata9.010
SRR5643528five period of Gastrodia elata6.910
SRR5643658five period of Gastrodia elata10.010
SRR5643659five period of Gastrodia elata15.170
SRR5643660five period of Gastrodia elata17.010
SRR5643661five period of Gastrodia elata15.630
SRR5643662five period of Gastrodia elata13.860
SRR5643663five period of Gastrodia elata22.350
SRR5643664five period of Gastrodia elata15.690
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.520
SRR6049655Rhizomagastrodiae_C368-T10_good_116.670
SRR6049656Rhizomagastrodiae_C368-T07_good_112.160
SRR6049657Rhizomagastrodiae_C368-T07_good_114.550
SRR6049658Rhizomagastrodiae_C368-T04_good_114.200
SRR6049659Rhizomagastrodiae_C368-T04_good_113.520
SRR6049660Rhizomagastrodiae_C368-T01_good_117.190
SRR6049661Rhizomagastrodiae_C368-T04_good_113.860
SRR6049662Rhizomagastrodiae_C368-T01_good_112.750
SRR6049663Rhizomagastrodiae_C368-T01_good_110.210
SRR6049664Rhizomagastrodiae_C368-T10_good_112.530
SRR6049665Rhizomagastrodiae_C368-T10_good_112.530
SRP279888GastroGastrodia elata tuber 13.46
JuvenJuvenile tuber17.96
Mother_GastroMother tuber of Gastrodia elata 7.77
Mother_JuvenMother tuber of Juvenile 13.43