Detail information of GWHGAAEX017787/evm.TU.scaffold_87.57


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|392381408|ref|YP_005030605.1|5.00E-13ATP synthase, F1 sector, epsilon subunit epsilon [Azospirillum brasilense Sp245]
KOGKOG17582.00E-99Mitochondrial F1F0-ATP synthase, subunit delta/ATP16
nrgi|695025897|ref|XP_009400218.1|1.12E-110PREDICTED: ATP synthase subunit delta', mitochondrial [Musa acuminata subsp. malaccensis]
Swissprottr|Q96252|ATP4_ARATH5.00E-100ATP synthase subunit delta', mitochondrial (Precursor)
trEMBLtr|M0SXZ3|M0SXZ3_MUSAM4.00E-111Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P12640_001}
TAIRAT5G470302.00E-99ATPase, F1 complex, delta/epsilon subunit

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008826308832643317-
Transcript Sequence

Network for GWHGAAEX017787

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02823.15ATP-synt_DE_N861571.70E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02134ATPeF1D, ATP5D, ATP16 Metabolic pathways map01100
Oxidative phosphorylationmap00190
Thermogenesismap04714

Gene Ontology

GO term OntologyName
GO:0015986Biological ProcessATP synthesis coupled proton transport
GO:0046933Molecular Functionproton-transporting ATP synthase activity, rotational mechanism
GO:0045261Cellular Componentproton-transporting ATP synthase complex, catalytic core F(1)

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms68.320
SRR2545915Juvenile tuber70.400
SRP108465SRR5643513five period of Gastrodia elata202.250
SRR5643514five period of Gastrodia elata296.360
SRR5643515five period of Gastrodia elata217.020
SRR5643524five period of Gastrodia elata281.630
SRR5643525five period of Gastrodia elata212.450
SRR5643528five period of Gastrodia elata191.280
SRR5643658five period of Gastrodia elata163.030
SRR5643659five period of Gastrodia elata147.860
SRR5643660five period of Gastrodia elata158.810
SRR5643661five period of Gastrodia elata170.400
SRR5643662five period of Gastrodia elata158.170
SRR5643663five period of Gastrodia elata147.200
SRR5643664five period of Gastrodia elata156.750
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1230.200
SRR6049655Rhizomagastrodiae_C368-T10_good_1475.890
SRR6049656Rhizomagastrodiae_C368-T07_good_1263.480
SRR6049657Rhizomagastrodiae_C368-T07_good_1205.090
SRR6049658Rhizomagastrodiae_C368-T04_good_1178.150
SRR6049659Rhizomagastrodiae_C368-T04_good_1171.660
SRR6049660Rhizomagastrodiae_C368-T01_good_1190.000
SRR6049661Rhizomagastrodiae_C368-T04_good_1195.430
SRR6049662Rhizomagastrodiae_C368-T01_good_1260.840
SRR6049663Rhizomagastrodiae_C368-T01_good_1228.320
SRR6049664Rhizomagastrodiae_C368-T10_good_1368.260
SRR6049665Rhizomagastrodiae_C368-T10_good_1368.260
SRP279888GastroGastrodia elata tuber 126.54
JuvenJuvenile tuber121.55
Mother_GastroMother tuber of Gastrodia elata 119.83
Mother_JuvenMother tuber of Juvenile 109.23