Detail information of GWHGAAEX017795/evm.TU.scaffold_87.70


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743828082|ref|XP_010933764.1|3.28E-110PREDICTED: UPF0496 protein 4-like [Elaeis guineensis]
Swissprottr|Q337C0|U496D_ORYSJ1.00E-87UPF0496 protein 4
trEMBLtr|M0VYF5|M0VYF5_HORVD2.00E-90Uncharacterized protein {ECO:0000313|EnsemblPlants:MLOC_38537.1}
TAIRAT2G460805.00E-75Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008831795263180740+
Transcript Sequence

Network for GWHGAAEX017795

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05633.10BPS1361802.60E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.990
SRR2545915Juvenile tuber15.250
SRP108465SRR5643513five period of Gastrodia elata12.910
SRR5643514five period of Gastrodia elata16.570
SRR5643515five period of Gastrodia elata13.210
SRR5643524five period of Gastrodia elata13.190
SRR5643525five period of Gastrodia elata12.340
SRR5643528five period of Gastrodia elata11.830
SRR5643658five period of Gastrodia elata13.360
SRR5643659five period of Gastrodia elata13.880
SRR5643660five period of Gastrodia elata14.450
SRR5643661five period of Gastrodia elata12.460
SRR5643662five period of Gastrodia elata17.100
SRR5643663five period of Gastrodia elata16.060
SRR5643664five period of Gastrodia elata12.950
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.390
SRR6049655Rhizomagastrodiae_C368-T10_good_115.110
SRR6049656Rhizomagastrodiae_C368-T07_good_19.860
SRR6049657Rhizomagastrodiae_C368-T07_good_112.640
SRR6049658Rhizomagastrodiae_C368-T04_good_19.100
SRR6049659Rhizomagastrodiae_C368-T04_good_110.170
SRR6049660Rhizomagastrodiae_C368-T01_good_112.060
SRR6049661Rhizomagastrodiae_C368-T04_good_18.790
SRR6049662Rhizomagastrodiae_C368-T01_good_19.000
SRR6049663Rhizomagastrodiae_C368-T01_good_19.580
SRR6049664Rhizomagastrodiae_C368-T10_good_114.960
SRR6049665Rhizomagastrodiae_C368-T10_good_114.960
SRP279888GastroGastrodia elata tuber 16.87
JuvenJuvenile tuber23.09
Mother_GastroMother tuber of Gastrodia elata 16.37
Mother_JuvenMother tuber of Juvenile 18.31