Detail information of GWHGAAEX017802/evm.TU.scaffold_87.86
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|428217557|ref|YP_007102022.1| | 0 | prolyl oligopeptidase [Pseudanabaena sp. PCC 7367] |
| KOG | KOG2237 | 0 | Predicted serine protease |
| nr | gi|743775581|ref|XP_010918173.1| | 0 | PREDICTED: prolyl endopeptidase [Elaeis guineensis] |
| trEMBL | tr|M0RSV5|M0RSV5_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P16750_001} |
| TAIR | AT1G76140 | 0 | Prolyl oligopeptidase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000088 | 3594926 | 3600670 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017802
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF02897.14 | Peptidase_S9_N | 12 | 431 | 7.10E-128 |
| PF00326.20 | Peptidase_S9 | 496 | 708 | 7.30E-60 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01322 | PREP | Renin-angiotensin system | map04614 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006508 | Biological Process | proteolysis |
| GO:0070008 | Molecular Function | serine-type exopeptidase activity |
| GO:0004252 | Molecular Function | serine-type endopeptidase activity |
| GO:0008236 | Molecular Function | serine-type peptidase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 7.100 |
| SRR2545915 | Juvenile tuber | 14.620 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 14.980 |
| SRR5643514 | five period of Gastrodia elata | 74.980 | |
| SRR5643515 | five period of Gastrodia elata | 35.630 | |
| SRR5643524 | five period of Gastrodia elata | 55.270 | |
| SRR5643525 | five period of Gastrodia elata | 28.790 | |
| SRR5643528 | five period of Gastrodia elata | 48.180 | |
| SRR5643658 | five period of Gastrodia elata | 48.320 | |
| SRR5643659 | five period of Gastrodia elata | 9.430 | |
| SRR5643660 | five period of Gastrodia elata | 10.490 | |
| SRR5643661 | five period of Gastrodia elata | 10.400 | |
| SRR5643662 | five period of Gastrodia elata | 12.430 | |
| SRR5643663 | five period of Gastrodia elata | 6.980 | |
| SRR5643664 | five period of Gastrodia elata | 9.800 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 36.030 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 26.180 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 31.450 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 19.170 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 46.190 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 37.190 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 39.610 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 33.200 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 135.940 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 79.330 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 76.000 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 76.000 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 5.98 |
| Juven | Juvenile tuber | 20.84 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 45.81 | |
| Mother_Juven | Mother tuber of Juvenile | 31.59 |