Detail information of GWHGAAEX017813/evm.TU.scaffold_87.99


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672125693|ref|XP_008786269.1|9.54E-42PREDICTED: ethylene-responsive transcription factor ERF105-like [Phoenix dactylifera]
Swissprottr|Q40478|ERF5_TOBAC8.00E-42Ethylene-responsive transcription factor 5
trEMBLtr|M1DKG6|M1DKG6_SOLTU9.00E-39Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400090475}
TAIRAT5G616005.00E-32ethylene response factor 104

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008839921963993900+
Transcript Sequence

Network for GWHGAAEX017813

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.19AP2641142.80E-13
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-ERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.670
SRR2545915Juvenile tuber1.540
SRP108465SRR5643513five period of Gastrodia elata22.620
SRR5643514five period of Gastrodia elata33.640
SRR5643515five period of Gastrodia elata39.630
SRR5643524five period of Gastrodia elata27.980
SRR5643525five period of Gastrodia elata40.580
SRR5643528five period of Gastrodia elata59.180
SRR5643658five period of Gastrodia elata31.820
SRR5643659five period of Gastrodia elata1.860
SRR5643660five period of Gastrodia elata0.340
SRR5643661five period of Gastrodia elata0.770
SRR5643662five period of Gastrodia elata0.760
SRR5643663five period of Gastrodia elata0.520
SRR5643664five period of Gastrodia elata1.440
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.400
SRR6049655Rhizomagastrodiae_C368-T10_good_17.810
SRR6049656Rhizomagastrodiae_C368-T07_good_111.560
SRR6049657Rhizomagastrodiae_C368-T07_good_19.630
SRR6049658Rhizomagastrodiae_C368-T04_good_18.940
SRR6049659Rhizomagastrodiae_C368-T04_good_112.880
SRR6049660Rhizomagastrodiae_C368-T01_good_113.820
SRR6049661Rhizomagastrodiae_C368-T04_good_15.190
SRR6049662Rhizomagastrodiae_C368-T01_good_16.070
SRR6049663Rhizomagastrodiae_C368-T01_good_114.770
SRR6049664Rhizomagastrodiae_C368-T10_good_116.640
SRR6049665Rhizomagastrodiae_C368-T10_good_116.640
SRP279888GastroGastrodia elata tuber 0.13
JuvenJuvenile tuber0.62
Mother_GastroMother tuber of Gastrodia elata 110.86
Mother_JuvenMother tuber of Juvenile 68.09