Detail information of GWHGAAEX017814/evm.TU.scaffold_87.100


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743778496|ref|XP_010919711.1|1.46E-66PREDICTED: ethylene-responsive transcription factor ERF105-like [Elaeis guineensis]
Swissprottr|Q40478|ERF5_TOBAC3.00E-50Ethylene-responsive transcription factor 5
trEMBLtr|F6I2P2|F6I2P2_VITVI3.00E-53Putative uncharacterized protein {ECO:0000313|EMBL:CCB61209.1}
TAIRAT5G472301.00E-41ethylene responsive element binding factor 5

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008840507154051870+
Transcript Sequence

Network for GWHGAAEX017814

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.19AP21712215.40E-14
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-ERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.140
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata29.400
SRR5643514five period of Gastrodia elata30.370
SRR5643515five period of Gastrodia elata35.990
SRR5643524five period of Gastrodia elata20.100
SRR5643525five period of Gastrodia elata1.910
SRR5643528five period of Gastrodia elata1.520
SRR5643658five period of Gastrodia elata0.740
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.130
SRR5643663five period of Gastrodia elata0.050
SRR5643664five period of Gastrodia elata0.430
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_149.720
SRR6049655Rhizomagastrodiae_C368-T10_good_180.580
SRR6049656Rhizomagastrodiae_C368-T07_good_147.790
SRR6049657Rhizomagastrodiae_C368-T07_good_122.910
SRR6049658Rhizomagastrodiae_C368-T04_good_142.980
SRR6049659Rhizomagastrodiae_C368-T04_good_132.300
SRR6049660Rhizomagastrodiae_C368-T01_good_123.780
SRR6049661Rhizomagastrodiae_C368-T04_good_120.130
SRR6049662Rhizomagastrodiae_C368-T01_good_154.210
SRR6049663Rhizomagastrodiae_C368-T01_good_156.650
SRR6049664Rhizomagastrodiae_C368-T10_good_1109.810
SRR6049665Rhizomagastrodiae_C368-T10_good_1109.810
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber0.00
Mother_GastroMother tuber of Gastrodia elata 2.10
Mother_JuvenMother tuber of Juvenile 0.03