Detail information of GWHGAAEX017816/evm.TU.scaffold_87.102


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG14153.00E-97Ubiquitin C-terminal hydrolase UCHL1
nrgi|672125709|ref|XP_008786278.1|7.11E-119PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L3-like isoform X2 [Phoenix dactylifera]
trEMBLtr|M0RUN0|M0RUN0_MUSAM2.00E-110Ubiquitin carboxyl-terminal hydrolase {ECO:0000256|RuleBase:RU361215}
TAIRAT4G175103.00E-97ubiquitin C-terminal hydrolase 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008841658694182674+
Transcript Sequence

Network for GWHGAAEX017816

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01088.20Peptidase_C12272313.40E-55
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyUCH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006511Biological Processubiquitin-dependent protein catabolic process
GO:0004843Molecular Functionthiol-dependent ubiquitin-specific protease activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms49.380
SRR2545915Juvenile tuber55.900
SRP108465SRR5643513five period of Gastrodia elata24.420
SRR5643514five period of Gastrodia elata23.030
SRR5643515five period of Gastrodia elata21.500
SRR5643524five period of Gastrodia elata26.880
SRR5643525five period of Gastrodia elata32.720
SRR5643528five period of Gastrodia elata47.350
SRR5643658five period of Gastrodia elata36.800
SRR5643659five period of Gastrodia elata21.230
SRR5643660five period of Gastrodia elata27.610
SRR5643661five period of Gastrodia elata21.580
SRR5643662five period of Gastrodia elata21.300
SRR5643663five period of Gastrodia elata19.850
SRR5643664five period of Gastrodia elata29.030
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.030
SRR6049655Rhizomagastrodiae_C368-T10_good_127.400
SRR6049656Rhizomagastrodiae_C368-T07_good_129.450
SRR6049657Rhizomagastrodiae_C368-T07_good_131.480
SRR6049658Rhizomagastrodiae_C368-T04_good_135.780
SRR6049659Rhizomagastrodiae_C368-T04_good_142.960
SRR6049660Rhizomagastrodiae_C368-T01_good_129.260
SRR6049661Rhizomagastrodiae_C368-T04_good_135.950
SRR6049662Rhizomagastrodiae_C368-T01_good_132.490
SRR6049663Rhizomagastrodiae_C368-T01_good_134.780
SRR6049664Rhizomagastrodiae_C368-T10_good_128.640
SRR6049665Rhizomagastrodiae_C368-T10_good_128.640
SRP279888GastroGastrodia elata tuber 42.60
JuvenJuvenile tuber30.02
Mother_GastroMother tuber of Gastrodia elata 25.43
Mother_JuvenMother tuber of Juvenile 22.47