Detail information of GWHGAAEX017819/evm.TU.scaffold_87.107


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|307154261|ref|YP_003889645.1|5.00E-12lipase class 3 [Cyanothece sp. PCC 7822]
KOGKOG45693.00E-139Predicted lipase
nrgi|672158154|ref|XP_008798807.1|1.34E-166PREDICTED: phospholipase A1-Ibeta2, chloroplastic [Phoenix dactylifera]
Swissprottr|O23522|PLA14_ARATH8.00E-141Phospholipase A1-Ibeta2, chloroplastic (Precursor)
trEMBLtr|A0A061GB30|A0A061GB30_THECC2.00E-155Alpha/beta-Hydrolases superfamily protein {ECO:0000313|EMBL:EOY24224.1}
TAIRAT4G168203.00E-139alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008842713844272814-
Transcript Sequence

Network for GWHGAAEX017819

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01764.24Lipase_32183601.10E-35
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006629Biological Processlipid metabolic process

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.570
SRR2545915Juvenile tuber3.260
SRP108465SRR5643513five period of Gastrodia elata15.700
SRR5643514five period of Gastrodia elata2.860
SRR5643515five period of Gastrodia elata63.780
SRR5643524five period of Gastrodia elata7.870
SRR5643525five period of Gastrodia elata18.600
SRR5643528five period of Gastrodia elata20.640
SRR5643658five period of Gastrodia elata5.420
SRR5643659five period of Gastrodia elata41.820
SRR5643660five period of Gastrodia elata8.820
SRR5643661five period of Gastrodia elata14.240
SRR5643662five period of Gastrodia elata54.460
SRR5643663five period of Gastrodia elata33.490
SRR5643664five period of Gastrodia elata64.800
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_150.060
SRR6049655Rhizomagastrodiae_C368-T10_good_135.600
SRR6049656Rhizomagastrodiae_C368-T07_good_111.970
SRR6049657Rhizomagastrodiae_C368-T07_good_119.380
SRR6049658Rhizomagastrodiae_C368-T04_good_141.890
SRR6049659Rhizomagastrodiae_C368-T04_good_149.700
SRR6049660Rhizomagastrodiae_C368-T01_good_181.340
SRR6049661Rhizomagastrodiae_C368-T04_good_140.810
SRR6049662Rhizomagastrodiae_C368-T01_good_117.950
SRR6049663Rhizomagastrodiae_C368-T01_good_143.370
SRR6049664Rhizomagastrodiae_C368-T10_good_127.920
SRR6049665Rhizomagastrodiae_C368-T10_good_127.920
SRP279888GastroGastrodia elata tuber 8.90
JuvenJuvenile tuber1.71
Mother_GastroMother tuber of Gastrodia elata 195.01
Mother_JuvenMother tuber of Juvenile 272.27