Detail information of GWHGAAEX017831/evm.TU.scaffold_88.11


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG26592.00E-82LisH motif-containing protein
nrgi|672169050|ref|XP_008804546.1|5.38E-107PREDICTED: glucose-induced degradation protein 8 homolog isoform X6 [Phoenix dactylifera]
trEMBLtr|K3XM21|K3XM21_SETIT6.00E-107Uncharacterized protein {ECO:0000313|EnsemblPlants:Si002944m}
TAIRAT1G060602.00E-82LisH and RanBPM domains containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000095165796191074+
Transcript Sequence

Network for GWHGAAEX017831

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10607.8CLTH561917.60E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.970
SRR2545915Juvenile tuber32.370
SRP108465SRR5643513five period of Gastrodia elata21.560
SRR5643514five period of Gastrodia elata23.890
SRR5643515five period of Gastrodia elata20.020
SRR5643524five period of Gastrodia elata22.020
SRR5643525five period of Gastrodia elata21.430
SRR5643528five period of Gastrodia elata13.380
SRR5643658five period of Gastrodia elata16.580
SRR5643659five period of Gastrodia elata20.440
SRR5643660five period of Gastrodia elata18.190
SRR5643661five period of Gastrodia elata21.520
SRR5643662five period of Gastrodia elata15.380
SRR5643663five period of Gastrodia elata19.690
SRR5643664five period of Gastrodia elata15.820
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.480
SRR6049655Rhizomagastrodiae_C368-T10_good_113.530
SRR6049656Rhizomagastrodiae_C368-T07_good_122.250
SRR6049657Rhizomagastrodiae_C368-T07_good_120.810
SRR6049658Rhizomagastrodiae_C368-T04_good_122.880
SRR6049659Rhizomagastrodiae_C368-T04_good_123.250
SRR6049660Rhizomagastrodiae_C368-T01_good_119.270
SRR6049661Rhizomagastrodiae_C368-T04_good_122.520
SRR6049662Rhizomagastrodiae_C368-T01_good_125.590
SRR6049663Rhizomagastrodiae_C368-T01_good_123.940
SRR6049664Rhizomagastrodiae_C368-T10_good_128.660
SRR6049665Rhizomagastrodiae_C368-T10_good_128.660
SRP279888GastroGastrodia elata tuber 14.46
JuvenJuvenile tuber11.73
Mother_GastroMother tuber of Gastrodia elata 12.89
Mother_JuvenMother tuber of Juvenile 7.37