Detail information of GWHGAAEX017833/evm.TU.scaffold_88.14


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|339327835|ref|YP_004687527.1|1.00E-110FAD dependent oxidoreductase [Cupriavidus necator N-1]
KOGKOG12320Proteins containing the FAD binding domain
nrgi|672169030|ref|XP_008804536.1|0PREDICTED: probable D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X2 [Phoenix dactylifera]
Swissprottr|Q7XI14|D2HDH_ORYSJ0Probable D-2-hydroxyglutarate dehydrogenase, mitochondrial (Precursor)
trEMBLtr|F6GWS1|F6GWS1_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB44406.1}
TAIRAT4G364000FAD-linked oxidases family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000095217844276918+
Transcript Sequence

Network for GWHGAAEX017833

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01565.22FAD_binding_41382734.20E-33
PF02913.18FAD-oxidase_C3145541.30E-55
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0050660Molecular Functionflavin adenine dinucleotide binding
GO:0003824Molecular Functioncatalytic activity
GO:0071949Molecular FunctionFAD binding
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.260
SRR2545915Juvenile tuber13.220
SRP108465SRR5643513five period of Gastrodia elata11.410
SRR5643514five period of Gastrodia elata11.910
SRR5643515five period of Gastrodia elata13.080
SRR5643524five period of Gastrodia elata12.410
SRR5643525five period of Gastrodia elata12.400
SRR5643528five period of Gastrodia elata18.260
SRR5643658five period of Gastrodia elata11.450
SRR5643659five period of Gastrodia elata8.800
SRR5643660five period of Gastrodia elata9.500
SRR5643661five period of Gastrodia elata8.370
SRR5643662five period of Gastrodia elata6.180
SRR5643663five period of Gastrodia elata8.260
SRR5643664five period of Gastrodia elata6.470
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.660
SRR6049655Rhizomagastrodiae_C368-T10_good_115.970
SRR6049656Rhizomagastrodiae_C368-T07_good_120.960
SRR6049657Rhizomagastrodiae_C368-T07_good_121.630
SRR6049658Rhizomagastrodiae_C368-T04_good_130.960
SRR6049659Rhizomagastrodiae_C368-T04_good_129.750
SRR6049660Rhizomagastrodiae_C368-T01_good_122.670
SRR6049661Rhizomagastrodiae_C368-T04_good_127.460
SRR6049662Rhizomagastrodiae_C368-T01_good_123.050
SRR6049663Rhizomagastrodiae_C368-T01_good_126.610
SRR6049664Rhizomagastrodiae_C368-T10_good_117.090
SRR6049665Rhizomagastrodiae_C368-T10_good_117.090
SRP279888GastroGastrodia elata tuber 11.80
JuvenJuvenile tuber8.15
Mother_GastroMother tuber of Gastrodia elata 6.26
Mother_JuvenMother tuber of Juvenile 7.03