Gene detail

Detail information of GWHGAAEX017834/evm.TU.scaffold_88.15

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG1910	Uncharacterized conserved protein
nr	gi\|743759537\|ref\|XP_010932714.1\|	PREDICTED: uncharacterized protein LOC105053302 isoform X2 [Elaeis guineensis]
trEMBL	tr\|A0A061FF08\|A0A061FF08_THECC	Golgi-body localization protein domain isoform 1 {ECO:0000313\|EMBL:EOY15493.1}
TAIR	AT1G58250	Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000095	278372	325021	-

Transcript Sequence
>GWHTAAEX017834 AGTAAGTAATATGGTAAGCTTACTTAGTTGAAACTATAAGATTTAGGTTAATGAAATTATAAGTTATGTTAAACTAAGCTGCAAAGTTGGAATATTATGAGGTTAAGCTGCGCTAACATTGAACTGAACATAGAATTACTTATTCTGGATGTCATCCTAAATGATAACCCTAACCCTACTTTGATAGGCATATTCCGTCCTGAATTAGAGTTTAACTCTCTTTATTTCTATTTTCTAATTTCTATCTTTTTTAGAAATAAGTTATTTTTGTTTCCAAATGCAGGGATACTATCAATCCTGCGTTTTTTCTGCTAATAATATAGCAGCAAAGGAAATTGAAGTACATGCAGAACTCAGTGAATTATCTTTTGTCATGAATAATGGAAGCAACCCACAAATGATGCAAAAACTACTAGGAGAGGAAAAAAGTTCTGAATCTTTATTGAATATTAAACGGTTAAACATTGATTGGGGTTCTAAAGATATTCAAAGTCATGAAAGGGATAATTCTCTTAACTGGAAGCAGACACTTTCTGTCGATCTAACTGGCATGGGTGTGTTCATTTGTCTTCAACAGATTGAAACTCTTGTTTCTACCGTAATGCTCTACAGGAAGCTTCTGAAAGATTCATCACTATCTAACAGGAAAGTTGCGCTGAATAGCTTGCCAAGTTCATGTAAAACCACAGTCAAACGGAGTCCAGTTATGAAAATGAATATTGATTGCTGTATAATGACGTTATATGGTGATATAAATGTTGAGGATGCGGTTGTGGCAGACCCTAAGCGGGTAAATTTTGGGTCACAAGGTGGTGAAGCAATAATCAATGAATCTTCAGATGGCACAACACGAACTGCAACTATACTTTCTAATCTCCCAGCTGATTGCAATCATGCCAAGTTCAAAACATCAATAGAAGTTGTTCGTCTCAGTTTGTACACAAATAAGGACAAGGAGCTAACACAGATTGGACTAGAGAGAGCAAAGTCAATCTACCTGGACTTTATTGAGGATGAGAAGAAGGGGCATAAAATTACAATATTTGACATACAAAAAACAAAGTTTGTGCGCCGTGCCAATGGAAAGGCTGATTCTATTCGTTCTCTTTTTAGTGTAGTTTATATAGCATTCCGGTGGGAGCCAGATGCACACTTGGCACTTTATGAATTTGCTATGCTAGTTAAATTTATTGTTCAGAACAAAATACTTGCAGATTCTGCTAGTGATATCGATGAACTATTCCTTCCCATGGAAGGCATTGTACCAGATAATGTTTACATGGATACAGTGCATTTGGAGGAGAAAAACCATAAAAGGGATTTTGTTTTTGCTATTGATGTTGAATACTTAAGAATATCTGCTGAGCTTGCAGATGGAGTAGAAGCTATGATTCATGCCAATTCAATATTCTCTGAAAATGCCAAGATAGGTGTTTTACTTGAAGGATTTATGCTTAGTTTCAATGAAGCCAGAATTCTAAAAAGTGGCCGTCTACAGTTATCTTCCGTTCCCATTTCAACAAGCATCTCTATTAATGAAAATTTTCAGTCTGTGGCTACGAGAAATTGGACTATCCAAGGTCTTGATGTTTGTTTTTGCTTACCTTATAGGTTGCAGTTGCGTGCTATTGATGATGCAGTTGAGGAGATGTTCCGTGGGTTGAAGCTTGTTACTTTTGCACTACATAATGCCATATTTCCCATAATTAAAGTTGGCCATAGAAACAAGAAATCCATCACTCCCAAAATTGGTTCTATTAGAATGATTATACATAGACTTACAGTTGATATTGAGGAAGAGCCAATGCAAGGATGGCTTGATGAGCACTACTATTTGCTGAAGAATGAAGTCTGTGAGTTAAATGCACGGTTAAAGTTTCTTGATGAGGTTATTTCTTCAAGGAGTGTTTCTGAATGTACTGAAACAAGTGATCATTGTTCAGAGAAAAAGATTTACTATAATGGGTTGGAAATAAATATAAGCGATATCACCTCAGTTCAACTACTACAGGAAGAGATCTACAGGCAATCTTTTAAGTCTTATCACCAGGCATGTCAGAAGTTAGTTCTGTCAGATGGATCAGGTGCATGCTTTAAAGGTTTCCAGTCAGGTTTTAAGCCAAGCAAAGTTAGAGGTTCACTTCTATCAATTTCTGCCATAGATTTGGATGTGAATTTAACTAAAATCAAAGGAGGCGTTCATGGAATGATTGAGTTCATTAAAAAGGTGGATCCTTTTTGCCTAGAGAATGATATTCCATTTTCTAGGCTTTATGGGACAGATCTTATTCTTAGTATCGGATCATTAGTTGTTCAGTTAAGAAATTATTCTTTTCCTATCTTTTCTGGGAACTCTGGCAATTGTCACGGCCATATTGTCCTAGCTCAGCAGGCAACTTGTTATCAGCCCCAAGTACAACAAGATGTTTTTGTTGGGAAATGGAGGAGGGTTCGCATGTTTCGGTCTGTAAGTGGCACAACTCCAGCAATGAAAACATACCTTGACCTTCCCATCTCTTTCCATAGAGGGGAAATTTCTTATGGAGTGGGATACGAACCAGTTTTTGCTGATGTGAACTATGCATTTACAGTAGCCCTCCGCAGAGCTAAACTTGGCTTAATGAATTCAAATCCAAGTCTGAATGTTCTTGAAGCAATTCCGCCTCCAAAAAAGGAGCGTGCCTTACCATGGTGGGATGATATAAGGTATTATATTCATGGAAAACTGGGATTGTTTTTTAGTTACTTTGAAGCAAACATATTAGCAACTTCTGATCCTTATGAAAAGAATGATAGAGTTCAGATTATTTCCCAAGAAATGGATATGAAGCAAACAGATGGCCGGGTAAAGTTTTCTTCCAAAGATTTTAGAATATTTATAAGCAGTATGCATGGCCTATTGAAAAATTCCATGCTGAAAATTCCATGTGGCACGTCTTTTCCTTTGCTCACCTGTCCTTCTTTCTCTGTTGATGTTGTCATGAATTGGGAGTGCGAATCTGGAAGTCCCCTTAATCATTATTTACATTCTCTGCCTAAAGAAGGAATACCTCGTCAAAAGGTTTATGATCCGTTTCGGTCACTCTCTCTCTCTCTTAAGTTGAATTTTTCTCTCGGTGTTTTGGAGCCTCCATATTATAAAAATGCTTCAACAACCACTGGGGATGGCTCCACAGAAATTGGTAGTATCGAGTTCTCAGAAAAGGTAGAAAGTATATTAGTTGATTCTCCAACTTTTATTCTTGGAGTTCATGACTTAGTTTGGTTATTGAAATGGTGGAACTTGGTCTATCTACCCCCTCAGAAACTCCGATCGTTTTCACGTTGGCCCCGCTTTGGAGTTCCTCGAGTAATTAGATCTGGCAACTTATCTCTGGATAAAGTTATGACAGAATTTTTCCTCCGCATTGATTCCACTCCTACTTCCATCAGATATCGCCCTTTAAGGGATGATGATCCTGCTAAAGGTCTAACATGTATAATTGAAAAACTAAAATGCGAACTCTGTTGGGGTCGTGGTAAACAGAAGTATACATTTGATTGCAAACGTGACATTCTAGATCTTGTTTACCATGGTTTTGATCTGCTCTCACTGAATGTCTATCTGCATAGAGATGTGCTCCAAAGCATTCAAACGATAAATATCATTTCACAATCTGCAGAGGAAGCTAAGAATGACAATGAAAAGCAAAATTTCATATGTAGACTTGGAAAAAAGCATGATTCTGAATTTCTTTTGTATATAAACTATTTCACTCTAAGAAGGCAAACTCCAAAGGCTGTTTGTTCGAGGTTATTAGCATGGCAAGAAACAGGAAGACAAAACCTTGAGATAGCTCAGCTGAAATACAAGGAAGGCAACAATAGTGACAGTGATGATGCACGTTCTGATCCAAGTGATGATGATGAATTCAATGTTGTAATAGCTGACAGTTGCCAACGCATATTTGTATATGGACTAAAGCTATTATGGACCCTAAAAAATAGAGATGCTATTTGTTCATTGGCTGTTGGATTGTCTAAAATTTTTGAGCCTCCAAAACCTTCTCCTTCTCGCCAGTATGCTCAGAGGAAGCTGCATGAGCAGCTGAAGGAACTGGATAAATCGGAAGTCCTTAATGATACCACTATTATTTCCTCAACTCAGACGGGCTTCACTGCTCTCTCTACACAGGCTATTGAGAATCAAGGAAGGCTTTCTGCTCCACCTCCTATAATGCAAGATGATAGCAAAACAGCTAAGTTGGTTGAAAATTATGAACAGATTAATGGCACTGAAGATGAGGGAACAGGGAATTTCATGGTCAATGTAGTTCAGCCTCAGTTTAATTTACAATCAGAAGATGCCAAAGGTCGGTTCCTGCTTGCTGCAGTAAGCGGATGTGTGTTAGCTCGTTCATTTCATTCTGTTCTTCATCTTGGATGTGATGTGATAGAAAAAGCACCTGAGACAGTGCCTGAGATGACATGGAAACGTGTTGAGTTATCTGTCATGCTGGAGCATGTTCAAGCTCATGTTGCACCAACTGATGTTGACCCTGGAGCTGGAATTCAATGGTTGCCCAAGATTCATAGAAGCTCTCAAAAAGTCAAGCGCACTGGTACTTTACTGGAAAGAGTGTTCATGCCTTGCCAAATGTACTTTCGCTACACTAGGCATAGAAGCATTGAGACAGGCTTTAAGGTGAAGCCTCTGAAAGAGCTTTCTTTCAATTCTCCCAATATTATGACAACAATGACATCATACCAGTTTCAGGTTATGCTAGATGTACTAAGCAACCTTCTCTTTGTCAGGTTTCCCAAGATGGACAAGAACTGTCTTTCATACCCATCAGAAGATGACGATGACATTGAAGAAGAGGCCGATGTGATCATTCCTAAGGGATTCAAAGAGGTAGAATTGGCAAGTGTAAAACTTGAGCAAATCAAAAGGGAAAGGAAATTATTGCTGGATGACATCAGGCTACTTTCAGCTAGCGGCGATATCTCATATGATCCCTTTATACATCAAGGAATTGATGGTGATTTATGGCTGTCAATTGGAGAGAAACCTAAATTGCTACAAGGGTTGAAGTTAGAGTTGGATAATAAAGAAAAGTCCAGGAAAACCACTTCTTCAGAGTTAAGAGTTGCTTTGCGAAAAGCTTCCCAGTTAAGTTTGATGGAGAAAGAAAAGAATAAAAGCCCTTCTTATGCAATGCGGATATCCATGCGAATAAGCAAGGTGGTATGGAGCATGATTGAAGAGGGAAAACCTTTTGCTGAAGTAGAAATAAATGATTTGGCCTATGATTTTGATCGTGATTTTAAAGACACCGGGATTGCTCGGTTCACCATCAAATCATTTACTGTAAAAAATGGCCTTCTTAATGCAAAGTCAGACATGCTGCTATCTGCTTGGAATGCGCCTTCTGAATGGGGGAAGAATTTTATGCTTCGTGTGGACGCAAAGCAAGGTGCGCCAAAGAATGGAAGTTCTCCTATTGAGCTTTTCCAGGTCGTTATCTATCCGCTGAAGATTCAGCTGACTGAAAGCATGTGGATGATGTGGCATTATTTCTTTCCGGAAGACGAACAAAATAATCAACTGAGGCGACGACAGGAATTATGGAAAGTTTCTACGGCCGCCGGATTGAAGCGTGGAAAGAAAGGCGGCGCCAATTCCGAGGAGACAGCCGCGTCACCTTTCCATCACCTTGCAAAAGATCTCGAGGCTTACCAAAGACCAAATGCCGTAGCATCAAAGGTCGTGAGGACAGAGAATAGCAAGAGCCTGAAGAAGGCCAAGGGGGGCGGCGGTGAGCTGAGGCGAACATCACCACTTGGCAAGACATGGGAAGGGAGTATAATAGCACAGTCGGCGGCGAACGATCTGGCGGTGGCGATGAGCGGCGCGGCCCGCTTCCCTCCGAGGAAGCGCCGACAGCTTCCGGCCGCAGACCACAGCAGAAAAGCGCTCACGGAGTTCCGTAATGTCAGGATCAGCCAGGTGGAGCTGCTGCTGGGGTACGAGGGATCGCGATTCCCGATCGGCGGGGATTGGAGACTGCTGATGGACACATTCCAGCGCGAGGAATTCGTGGGGACGTGGGGAAGGCTCTTCTCCCGGATCAAGAAGCACGTCATCATATCGGTGTTGAAATCAGTGGCCGGGATGCAGGGCAAGAAGTTCAAGGGGAAGTCACATGGCGCGCGGCAGACAAAGGAAGAAGAAGAAGGAGATCCAAATCACGGCGATGGAGGCGGGGGAGAGATGGAGGAGGGGGTTCTGCTGCTGCAGCAGCTTCTGAAGAGTCATGCCGAGGAGGGGGGCGCGGGAGAAGGGTTTGTGAGGTCGATCAGAGGGCTCTTCAGGTCGCAGCGGCGGAGGGCGAAGGCGCTGGTGCGAAGGACCATGAGGGGAGCTCAAGGCTATCCCTTCGCTAGGCAGCTCACCATCCACGCCAAAACCACATTACCAGAAGAAGCGTCTTCGTCGTCGTCCTCGAAGGAGGGAGCCCAGCCAATTGGGCATCAAGTAAATGATGATGATTTTGATGATTCCACAGACGCCTCTTCATCTGAAGATGACATTAGAGACTAGATCAGAAAAAATAAATATTTGACTCTGATTTTGATAATATAAAAAAGTATTAATGATTAAAATTTATACTGACTAATTCAAAATTTATACTCCCTTCTTTTTTCCGGTTAAAGGATTTTTCTGCTAATCTATTGGCTGATGGTTTTTAATTCTTCTGATGGCTTGCTGGGTTCATGTTTTAACTTGAGGATCTTTTCTTTTCGTAATTTGAGATGGTCTTAAAATCCTTTTGTTTAATTTGTTATGATTCTAATGCTTATTGGACAAATTGCTTTCTACTAGGATGGCTCTTGACAAGC

Network for GWHGAAEX017834

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF10351.8	Apt1	1448	1956	2.30E-80

Protein Sequence

>GWHPAAEX017834
MQGYYQSCVFSANNIAAKEIEVHAELSELSFVMNNGSNPQMMQKLLGEEKSSESLLNIKRLNIDWGSKDIQSHERDNSLNWKQTLSVDLTGMGVFICLQQIETLVSTVMLYRKLLKDSSLSNRKVALNSLPSSCKTTVKRSPVMKMNIDCCIMTLYGDINVEDAVVADPKRVNFGSQGGEAIINESSDGTTRTATILSNLPADCNHAKFKTSIEVVRLSLYTNKDKELTQIGLERAKSIYLDFIEDEKKGHKITIFDIQKTKFVRRANGKADSIRSLFSVVYIAFRWEPDAHLALYEFAMLVKFIVQNKILADSASDIDELFLPMEGIVPDNVYMDTVHLEEKNHKRDFVFAIDVEYLRISAELADGVEAMIHANSIFSENAKIGVLLEGFMLSFNEARILKSGRLQLSSVPISTSISINENFQSVATRNWTIQGLDVCFCLPYRLQLRAIDDAVEEMFRGLKLVTFALHNAIFPIIKVGHRNKKSITPKIGSIRMIIHRLTVDIEEEPMQGWLDEHYYLLKNEVCELNARLKFLDEVISSRSVSECTETSDHCSEKKIYYNGLEINISDITSVQLLQEEIYRQSFKSYHQACQKLVLSDGSGACFKGFQSGFKPSKVRGSLLSISAIDLDVNLTKIKGGVHGMIEFIKKVDPFCLENDIPFSRLYGTDLILSIGSLVVQLRNYSFPIFSGNSGNCHGHIVLAQQATCYQPQVQQDVFVGKWRRVRMFRSVSGTTPAMKTYLDLPISFHRGEISYGVGYEPVFADVNYAFTVALRRAKLGLMNSNPSLNVLEAIPPPKKERALPWWDDIRYYIHGKLGLFFSYFEANILATSDPYEKNDRVQIISQEMDMKQTDGRVKFSSKDFRIFISSMHGLLKNSMLKIPCGTSFPLLTCPSFSVDVVMNWECESGSPLNHYLHSLPKEGIPRQKVYDPFRSLSLSLKLNFSLGVLEPPYYKNASTTTGDGSTEIGSIEFSEKVESILVDSPTFILGVHDLVWLLKWWNLVYLPPQKLRSFSRWPRFGVPRVIRSGNLSLDKVMTEFFLRIDSTPTSIRYRPLRDDDPAKGLTCIIEKLKCELCWGRGKQKYTFDCKRDILDLVYHGFDLLSLNVYLHRDVLQSIQTINIISQSAEEAKNDNEKQNFICRLGKKHDSEFLLYINYFTLRRQTPKAVCSRLLAWQETGRQNLEIAQLKYKEGNNSDSDDARSDPSDDDEFNVVIADSCQRIFVYGLKLLWTLKNRDAICSLAVGLSKIFEPPKPSPSRQYAQRKLHEQLKELDKSEVLNDTTIISSTQTGFTALSTQAIENQGRLSAPPPIMQDDSKTAKLVENYEQINGTEDEGTGNFMVNVVQPQFNLQSEDAKGRFLLAAVSGCVLARSFHSVLHLGCDVIEKAPETVPEMTWKRVELSVMLEHVQAHVAPTDVDPGAGIQWLPKIHRSSQKVKRTGTLLERVFMPCQMYFRYTRHRSIETGFKVKPLKELSFNSPNIMTTMTSYQFQVMLDVLSNLLFVRFPKMDKNCLSYPSEDDDDIEEEADVIIPKGFKEVELASVKLEQIKRERKLLLDDIRLLSASGDISYDPFIHQGIDGDLWLSIGEKPKLLQGLKLELDNKEKSRKTTSSELRVALRKASQLSLMEKEKNKSPSYAMRISMRISKVVWSMIEEGKPFAEVEINDLAYDFDRDFKDTGIARFTIKSFTVKNGLLNAKSDMLLSAWNAPSEWGKNFMLRVDAKQGAPKNGSSPIELFQVVIYPLKIQLTESMWMMWHYFFPEDEQNNQLRRRQELWKVSTAAGLKRGKKGGANSEETAASPFHHLAKDLEAYQRPNAVASKVVRTENSKSLKKAKGGGGELRRTSPLGKTWEGSIIAQSAANDLAVAMSGAARFPPRKRRQLPAADHSRKALTEFRNVRISQVELLLGYEGSRFPIGGDWRLLMDTFQREEFVGTWGRLFSRIKKHVIISVLKSVAGMQGKKFKGKSHGARQTKEEEEGDPNHGDGGGGEMEEGVLLLQQLLKSHAEEGGAGEGFVRSIRGLFRSQRRRAKALVRRTMRGAQGYPFARQLTIHAKTTLPEEASSSSSSKEGAQPIGHQVNDDDFDDSTDASSSEDDIRD

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	8.200
SRP064423	SRR2545915	Juvenile tuber	4.890
SRP108465	SRR5643513	five period of Gastrodia elata	3.480
	SRR5643514	five period of Gastrodia elata	3.230
	SRR5643515	five period of Gastrodia elata	3.540
	SRR5643524	five period of Gastrodia elata	3.140
	SRR5643525	five period of Gastrodia elata	3.100
	SRR5643528	five period of Gastrodia elata	3.030
	SRR5643658	five period of Gastrodia elata	3.200
	SRR5643659	five period of Gastrodia elata	3.450
	SRR5643660	five period of Gastrodia elata	4.540
	SRR5643661	five period of Gastrodia elata	3.140
	SRR5643662	five period of Gastrodia elata	2.320
	SRR5643663	five period of Gastrodia elata	4.400
	SRR5643664	five period of Gastrodia elata	3.010
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.410
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.990
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	3.170
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	3.880
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.090
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.590
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.070
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	2.870
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	2.420
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	2.310
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	2.630
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	2.630
SRP279888	Gastro	Gastrodia elata tuber	4.40
	Juven	Juvenile tuber	5.62
	Mother_Gastro	Mother tuber of Gastrodia elata	7.16
	Mother_Juven	Mother tuber of Juvenile	9.23