Detail information of GWHGAAEX017836/evm.TU.scaffold_88.18
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG2608 | 0 | Endoplasmic reticulum membrane-associated oxidoreductin involved in disulfide bond formation |
| nr | gi|743759511|ref|XP_010932625.1| | 0 | PREDICTED: endoplasmic reticulum oxidoreductin-1-like isoform X1 [Elaeis guineensis] |
| Swissprot | tr|Q9C7S7|ERO1_ARATH | 0 | Endoplasmic reticulum oxidoreductin-1 (Precursor) |
| trEMBL | tr|M0TZ86|M0TZ86_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P10770_001} |
| TAIR | AT1G72280 | 0 | endoplasmic reticulum oxidoreductins 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000095 | 433136 | 457628 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017836
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF04137.14 | ERO1 | 80 | 426 | 1.00E-120 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K10950 | ERO1L | Protein processing in endoplasmic reticulum | map04141 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0016671 | Molecular Function | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor |
| GO:0003756 | Molecular Function | protein disulfide isomerase activity |
| GO:0005783 | Cellular Component | endoplasmic reticulum |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 46.010 |
| SRR2545915 | Juvenile tuber | 50.630 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 27.320 |
| SRR5643514 | five period of Gastrodia elata | 23.290 | |
| SRR5643515 | five period of Gastrodia elata | 33.810 | |
| SRR5643524 | five period of Gastrodia elata | 26.150 | |
| SRR5643525 | five period of Gastrodia elata | 27.780 | |
| SRR5643528 | five period of Gastrodia elata | 49.740 | |
| SRR5643658 | five period of Gastrodia elata | 24.110 | |
| SRR5643659 | five period of Gastrodia elata | 36.240 | |
| SRR5643660 | five period of Gastrodia elata | 39.110 | |
| SRR5643661 | five period of Gastrodia elata | 41.570 | |
| SRR5643662 | five period of Gastrodia elata | 45.150 | |
| SRR5643663 | five period of Gastrodia elata | 43.340 | |
| SRR5643664 | five period of Gastrodia elata | 40.160 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 28.550 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 30.720 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 26.390 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 22.320 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 25.170 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 25.190 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 20.560 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 21.880 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 27.140 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 25.620 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 41.420 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 41.420 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 41.56 |
| Juven | Juvenile tuber | 36.29 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 67.27 | |
| Mother_Juven | Mother tuber of Juvenile | 79.79 |