Detail information of GWHGAAEX017837/evm.TU.scaffold_88.19


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|320160728|ref|YP_004173952.1|3.00E-64GTP-binding protein [Anaerolinea thermophila UNI-1]
KOGKOG14897.00E-49Predicted GTP-binding protein (ODN superfamily)
nrgi|695024331|ref|XP_009399374.1|0PREDICTED: probable GTP-binding protein OBGC2 [Musa acuminata subsp. malaccensis]
Swissprottr|Q851Q6|OBGC2_ORYSJ0Probable GTP-binding protein OBGC2
trEMBLtr|M0SVA3|M0SVA3_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P03240_001}
TAIRAT5G185707.00E-49GTP1/OBG family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000095466728489683+
Transcript Sequence

Network for GWHGAAEX017837

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01018.21GTP1_OBG882795.30E-20
PF01926.22MMR_HSR12834105.30E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005525Molecular FunctionGTP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.450
SRR2545915Juvenile tuber20.330
SRP108465SRR5643513five period of Gastrodia elata20.340
SRR5643514five period of Gastrodia elata18.270
SRR5643515five period of Gastrodia elata16.570
SRR5643524five period of Gastrodia elata15.440
SRR5643525five period of Gastrodia elata18.520
SRR5643528five period of Gastrodia elata20.570
SRR5643658five period of Gastrodia elata19.110
SRR5643659five period of Gastrodia elata20.860
SRR5643660five period of Gastrodia elata24.580
SRR5643661five period of Gastrodia elata25.290
SRR5643662five period of Gastrodia elata28.670
SRR5643663five period of Gastrodia elata27.460
SRR5643664five period of Gastrodia elata32.310
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.130
SRR6049655Rhizomagastrodiae_C368-T10_good_115.050
SRR6049656Rhizomagastrodiae_C368-T07_good_118.660
SRR6049657Rhizomagastrodiae_C368-T07_good_116.000
SRR6049658Rhizomagastrodiae_C368-T04_good_123.620
SRR6049659Rhizomagastrodiae_C368-T04_good_123.670
SRR6049660Rhizomagastrodiae_C368-T01_good_118.930
SRR6049661Rhizomagastrodiae_C368-T04_good_124.100
SRR6049662Rhizomagastrodiae_C368-T01_good_123.920
SRR6049663Rhizomagastrodiae_C368-T01_good_118.530
SRR6049664Rhizomagastrodiae_C368-T10_good_116.150
SRR6049665Rhizomagastrodiae_C368-T10_good_116.150
SRP279888GastroGastrodia elata tuber 24.41
JuvenJuvenile tuber14.59
Mother_GastroMother tuber of Gastrodia elata 13.55
Mother_JuvenMother tuber of Juvenile 11.20