Detail information of GWHGAAEX017856/evm.TU.scaffold_88.40


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743857345|ref|XP_010942097.1|3.00E-56PREDICTED: uncharacterized protein LOC105060185 [Elaeis guineensis]
trEMBLtr|B6T8C0|B6T8C0_MAIZE1.00E-54Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM2G131434_P01}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000095967673976057-
Transcript Sequence

Network for GWHGAAEX017856

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02297.16COX6B11812.90E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K18179COA6 Thermogenesis map04714

Gene Ontology

GO term OntologyName
GO:0005739Cellular Componentmitochondrion

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.890
SRR2545915Juvenile tuber8.890
SRP108465SRR5643513five period of Gastrodia elata10.450
SRR5643514five period of Gastrodia elata12.370
SRR5643515five period of Gastrodia elata11.290
SRR5643524five period of Gastrodia elata11.450
SRR5643525five period of Gastrodia elata11.710
SRR5643528five period of Gastrodia elata11.450
SRR5643658five period of Gastrodia elata9.830
SRR5643659five period of Gastrodia elata11.310
SRR5643660five period of Gastrodia elata16.180
SRR5643661five period of Gastrodia elata16.850
SRR5643662five period of Gastrodia elata12.070
SRR5643663five period of Gastrodia elata9.990
SRR5643664five period of Gastrodia elata12.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.730
SRR6049655Rhizomagastrodiae_C368-T10_good_124.570
SRR6049656Rhizomagastrodiae_C368-T07_good_19.900
SRR6049657Rhizomagastrodiae_C368-T07_good_19.320
SRR6049658Rhizomagastrodiae_C368-T04_good_110.260
SRR6049659Rhizomagastrodiae_C368-T04_good_110.410
SRR6049660Rhizomagastrodiae_C368-T01_good_112.050
SRR6049661Rhizomagastrodiae_C368-T04_good_110.280
SRR6049662Rhizomagastrodiae_C368-T01_good_110.630
SRR6049663Rhizomagastrodiae_C368-T01_good_111.780
SRR6049664Rhizomagastrodiae_C368-T10_good_18.950
SRR6049665Rhizomagastrodiae_C368-T10_good_18.950
SRP279888GastroGastrodia elata tuber 13.17
JuvenJuvenile tuber10.31
Mother_GastroMother tuber of Gastrodia elata 19.37
Mother_JuvenMother tuber of Juvenile 19.43