Detail information of GWHGAAEX017861/evm.TU.scaffold_88.47


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743811400|ref|XP_010929157.1|5.30E-83PREDICTED: probable WRKY transcription factor 40 isoform X2 [Elaeis guineensis]
Swissprottr|Q9SAH7|WRK40_ARATH1.00E-54Probable WRKY transcription factor 40
trEMBLtr|E5G078|E5G078_MUSPR1.00E-68Transcription factor WRKY71 {ECO:0000313|EMBL:ADR71866.1}
TAIRAT1G808405.00E-54WRKY DNA-binding protein 40

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009511613971163208+
Transcript Sequence

Network for GWHGAAEX017861

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03106.14WRKY1411984.40E-25
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.840
SRR2545915Juvenile tuber6.630
SRP108465SRR5643513five period of Gastrodia elata36.710
SRR5643514five period of Gastrodia elata4.500
SRR5643515five period of Gastrodia elata149.190
SRR5643524five period of Gastrodia elata27.330
SRR5643525five period of Gastrodia elata11.150
SRR5643528five period of Gastrodia elata95.390
SRR5643658five period of Gastrodia elata11.820
SRR5643659five period of Gastrodia elata48.910
SRR5643660five period of Gastrodia elata15.310
SRR5643661five period of Gastrodia elata51.670
SRR5643662five period of Gastrodia elata59.220
SRR5643663five period of Gastrodia elata23.300
SRR5643664five period of Gastrodia elata5.580
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.400
SRR6049655Rhizomagastrodiae_C368-T10_good_10.400
SRR6049656Rhizomagastrodiae_C368-T07_good_12.100
SRR6049657Rhizomagastrodiae_C368-T07_good_14.050
SRR6049658Rhizomagastrodiae_C368-T04_good_10.390
SRR6049659Rhizomagastrodiae_C368-T04_good_10.070
SRR6049660Rhizomagastrodiae_C368-T01_good_17.510
SRR6049661Rhizomagastrodiae_C368-T04_good_11.440
SRR6049662Rhizomagastrodiae_C368-T01_good_12.250
SRR6049663Rhizomagastrodiae_C368-T01_good_14.160
SRR6049664Rhizomagastrodiae_C368-T10_good_14.290
SRR6049665Rhizomagastrodiae_C368-T10_good_14.290
SRP279888GastroGastrodia elata tuber 5.64
JuvenJuvenile tuber4.82
Mother_GastroMother tuber of Gastrodia elata 50.24
Mother_JuvenMother tuber of Juvenile 67.15